RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 CHRDL2Q6WN34 429 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 DGAT2L6Q6ZPD8 337 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 DOK4Q8TEW6 326 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 ANAPC16Q96DE5 110 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 ADOQ96SZ5 270 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 TXNDC17Q9BRA2 123 aa4.43□□□□□ -1.7
RIF1-203ENST00000428287 EDN3P14138 238 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 GZMHP20718 246 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 G0S2P27469 103 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR8B12Q8NGG6 310 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ZPBPQ9BS86 351 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 SMIM3Q9BZL3 60 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR2J1Q9GZK6 312 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 BANF2Q9H503 90 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 GPR35Q9HC97 309 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TBX21Q9UL17 535 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TP53TG3Q9ULZ0 132 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TRAV9-1A0A075B6T8 112 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 IGKV1D-43A0A0B4J1Z2 117 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TRAV39A0A0B4J263 110 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MPPED1O15442 326 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 DDAH2O95865 285 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR4A8P0C604 315 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 AADACP22760 399 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 SRP14P37108 136 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR3A4PP47883 348 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 Q0VG73 95 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR2D3Q8NGH3 330 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 C11orf40Q8WZ69 217 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 RFNGQ9Y644 331 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NBEAL1Q6ZS30 2694 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 HLA-DOBP13765 273 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TMEM256Q8N2U0 113 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 RAB40CQ96S21 281 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NAT8Q9UHE5 227 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 A0A1W2PNV4 684 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 C20orf202A1L168 122 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 P2RY10O00398 339 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 CLPSP04118 112 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 REG1AP05451 166 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ADH5P11766 374 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 GNG10P50151 68 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ENDOGQ14249 297 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 CXorf66Q5JRM2 361 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 Q8N976 141 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 RERGQ96A58 199 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 FAM122AQ96E09 287 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 CHODLQ9H9P2 273 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 SEPSECSQ9HD40 501 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 GNG13Q9P2W3 67 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 IL17BQ9UHF5 180 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 GCN1Q92616 2671 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 IGKV3D-11A0A0A0MRZ8 115 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NKX6-3A6NJ46 265 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NPIPA2E9PIF3 369 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 CCL25O15444 150 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 DHRS3O75911 302 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MDH2P40926 338 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 ZP2Q05996 745 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 STPG4Q8N801 248 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR4F17Q8NGA8 305 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR10G8Q8NGN5 311 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR4F4Q96R69 305 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TP53RKQ96S44 253 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ATP5SQ99766 215 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 PECRQ9BY49 303 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 PARLQ9H300 379 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 H0YIG0 161 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 POU2F2P09086 479 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 H2BFMP0C1H6 154 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 CTSEP14091 401 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 PAFAH1B2P68402 229 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 FMODQ06828 376 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TRA2AQ13595 282 aaKnown RBP eCLIP4.42□□□□□ -1.72e-8■■■□□ 17.3
RIF1-203ENST00000428287 TMEM183BQ1AE95 376 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 H1FNTQ75WM6 255 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 GCNT2Q8N0V5 402 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MRPL43Q8N983 215 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 ASB10Q8WXI3 467 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 RAB1CQ92928 201 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 HLA-CQ95604 372 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 STRADBQ9C0K7 418 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 DNAJC4Q9NNZ3 241 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 PARD6AQ9NPB6 346 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NAGKQ9UJ70 344 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 LAMP3Q9UQV4 416 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 TIMM9Q9Y5J7 89 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 NDUFB8O95169 186 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 SELEP16581 610 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MDKP21741 143 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 DOK3Q7L591 496 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ABHD12BQ7Z5M8 362 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 CCDC71LQ8N9Z2 235 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 OR1E3Q8WZA6 343 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms