RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SLAMF6Q96DU3 332 aa8.56□□□□□ -1.04
USP54-205ENST00000424265 DSPPQ9NZW4 1301 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 LOC105371242A0A075B767 164 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 MED19A0JLT2 244 aaPredicted RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 HSPB2A8KAH6 182 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 C9orf172C9J069 976 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 IL18BPO95998 194 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 RPS4Y1P22090 263 aaKnown RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 HSPB2Q16082 182 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 RBM45Q8IUH3 476 aaKnown RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 POM121L2Q96KW2 1035 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TXNIPQ9H3M7 391 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 HIF1ANQ9NWT6 349 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 LIPGQ9Y5X9 500 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 KNTC1P50748 2209 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 A0A1B0GTI1 187 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 LOC101059948A0A1B0GTJ6 334 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TOMM40O96008 361 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 CLDN17P56750 224 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 FAM3AP98173 230 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TMEM211Q6ICI0 200 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 OLIG3Q7RTU3 272 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 RARRES2Q99969 163 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 NMNAT2Q9BZQ4 307 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 WASHC3Q9Y3C0 194 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 OR5B21A6NL26 309 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 SP1P08047 785 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 OR2G3Q8NGZ4 309 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 SLC25A38Q96DW6 304 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 C2orf50Q96LR7 162 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 RBM24Q9BX46 236 aaKnown RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 CMC2Q9NRP2 79 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 PSG11Q9UQ72 335 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TMEM8BA6NDV4 472 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 IGF2-ASQ6U949 168 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TUSC5Q8IXB3 177 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 TMEM123Q8N131 208 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 FNDC9Q8TBE3 224 aa8.55□□□□□ -1.04
USP54-205ENST00000424265 ELL3Q9HB65 397 aaPredicted RBP8.55□□□□□ -1.04
USP54-205ENST00000424265 IGHV2OR16-5A0A0B4J2B6 119 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 WNT11O96014 354 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 IL2RAP01589 272 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 RTP5Q14D33 572 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 ZNF74Q16587 644 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 BSXQ3C1V8 233 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 ZFP62Q8NB50 900 aaPredicted RBP8.54□□□□□ -1.04
USP54-205ENST00000424265 FAM222BQ8WU58 562 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 IMMP1LQ96LU5 166 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 FOXD3Q9UJU5 478 aaPredicted RBP8.54□□□□□ -1.04
USP54-205ENST00000424265 SSX8Q7RTT4 187 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 CYB561D1Q8N8Q1 229 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 OR2M3Q8NG83 312 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 SPSB1Q96BD6 273 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
USP54-205ENST00000424265 MOB1AQ9H8S9 216 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 CDH20Q9HBT6 801 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 CYTL1Q9NRR1 136 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 TECTAO75443 2155 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 A0A0G2JK05 382 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 SLC16A7O60669 478 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 HERV-K104P63124 156 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 MZT1Q08AG7 82 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 RAB32Q13637 225 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 OR4P4Q8NGL7 312 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 OR10S1Q8NGN2 331 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 HCAR1Q9BXC0 346 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 MAGT1Q9H0U3 335 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 MED20Q9H944 212 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 ICAM5Q9UMF0 924 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 A0A1B0GU03 582 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 OR6C6A6NF89 314 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 ARPC3O15145 178 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
USP54-205ENST00000424265 CTSDP07339 412 aaPredicted RBP8.54□□□□□ -1.04
USP54-205ENST00000424265 TMEM225BP0DP42 221 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 AZU1P20160 251 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 PSMB10P40306 273 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 CHRDL1Q9BU40 450 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 SS18L2Q9UHA2 77 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 NAT8Q9UHE5 227 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 OSGIN2Q9Y236 505 aa8.54□□□□□ -1.04
USP54-205ENST00000424265 HRKO00198 91 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 CTSBP07858 339 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 SIRPAP78324 504 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 DGAT2L6Q6ZPD8 337 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 PFN4Q8NHR9 129 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 GPER1Q99527 375 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 SCN8AQ9UQD0 1980 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 SLC22A20A6NK97 555 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 SEC11BP0C7V7 166 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 OTX1P32242 354 aaPredicted RBP8.53□□□□□ -1.04
USP54-205ENST00000424265 GPR157Q5UAW9 335 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 FBXW12Q6X9E4 464 aa8.53□□□□□ -1.04
USP54-205ENST00000424265 BHLHA15Q7RTS1 189 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms