RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 NICN1Q9BSH3 213 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 WFDC1Q9HC57 220 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 V9GYS6 101 aa12.74□□□□□ -0.37
SEMA4D-204ENST00000420101 FREM2Q5SZK8 3169 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF292O60281 2723 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 PITX3O75364 302 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 PPP1CCP36873 323 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 SRPXP78539 464 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 RNPS1Q15287 305 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 CEACAM16Q2WEN9 425 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 SPSB3Q6PJ21 355 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF283Q8N7M2 679 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 GJC3Q8NFK1 279 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 FRZBQ92765 325 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF837Q96EG3 531 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 ARHGAP5-AS1Q96IT6 56 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 PARP12Q9H0J9 701 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 PRO1933Q9H354 126 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
SEMA4D-204ENST00000420101 TGIF2-C20orf24A0A0A6YYL0 155 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF732B4DXR9 585 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 PHOX2AO14813 284 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 KNG1P01042 644 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 HCKP08631 526 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 GZMBP10144 247 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 COX5BP10606 129 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 MMP9P14780 707 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 B4GALT1P15291 398 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 CCKARP32238 428 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF133P52736 654 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 SLC25A26Q70HW3 274 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 COMMD2Q86X83 199 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 SPACA3Q8IXA5 215 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 OR10S1Q8NGN2 331 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 MRPL24Q96A35 216 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 NAA60Q9H7X0 242 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 PRR13Q9NZ81 148 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 IGKV3D-15A0A087WSY6 115 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 M0R143 59 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 RAD51DO75771 328 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 TK1P04183 234 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 CCL1P22362 96 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 MTCP1P56278 107 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 GRB2P62993 217 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 MRPS34P82930 218 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 HAGHQ16775 308 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 ZNF100Q8IYN0 542 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 LGI3Q8N145 548 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 OR2G3Q8NGZ4 309 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 NABP1Q96AH0 204 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 FOXB1Q99853 325 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 SRD5A3Q9H8P0 318 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 GPR35Q9HC97 309 aa12.72□□□□□ -0.37
SEMA4D-204ENST00000420101 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
SEMA4D-204ENST00000420101 PPP5D1E7EU14 171 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 LMX1BO60663 402 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 CDS2O95674 445 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 LINC00614P0C842 121 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 FHITP49789 147 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 ENDOGQ14249 297 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 TMEM187Q14656 261 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 ICAM4Q14773 271 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 ACSF3Q4G176 576 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 TSPO2Q5TGU0 170 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 C9orf135Q5VTT2 229 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 LIAT1Q6ZQX7 453 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 OR5AS1Q8N127 324 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 TMEM104Q8NE00 496 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 APH1AQ96BI3 265 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 C18orf12Q96KH6 178 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 P2RX4Q99571 388 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 RARRES2Q99969 163 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 PLEK2Q9NYT0 353 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 AK3Q9UIJ7 227 aa12.71□□□□□ -0.38
SEMA4D-204ENST00000420101 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 CRTAPO75718 401 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 SCGB1D2O95969 90 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 PDLIM4P50479 330 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 BAXQ07812 192 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 IQCJQ1A5X6 159 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 IGFL3Q6UXB1 125 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 FBXW12Q6X9E4 464 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 FOXL2NBQ6ZUU3 175 aa12.7□□□□□ -0.38
SEMA4D-204ENST00000420101 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms