RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 NUFIP2Q7Z417 695 aaKnown RBP12.35□□□□□ -0.43
HDAC9-208ENST00000417496 CMTM1Q8IZ96 169 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 MRPL30Q8TCC3 161 aaKnown RBP12.35□□□□□ -0.43
HDAC9-208ENST00000417496 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
HDAC9-208ENST00000417496 TMEM45BQ96B21 275 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 TAAR9Q96RI9 348 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 TUBA4BQ9H853 241 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 OR1A1Q9P1Q5 309 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 URGCP-MRPS24S4R325 110 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 DIDO1Q9BTC0 2240 aaKnown RBP12.35□□□□□ -0.43
HDAC9-208ENST00000417496 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 H3BQ15 152 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 UBE2CO00762 179 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 LAMTOR5O43504 91 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 OR2C1O95371 312 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 IGHEP01854 428 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 PSG2P11465 335 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 HOXA6P31267 233 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 PLA2G5P39877 138 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 POM121L2Q96KW2 1035 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 RNF115Q9Y4L5 304 aa12.35□□□□□ -0.43
HDAC9-208ENST00000417496 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 SLC34A2O95436 690 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 CA6P23280 308 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 RHEBQ15382 184 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 OR2T2Q6IF00 324 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 Q6ZS49 121 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
HDAC9-208ENST00000417496 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 B4E171 279 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 F2RP25116 425 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 WNT5AP41221 380 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 TSPAN7P41732 249 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 KIR2DS4P43632 304 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 B2MP61769 119 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 KIR2DS1Q14954 304 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 NCMAPQ5T1S8 102 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 THNSL2Q86YJ6 484 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 GPR146Q96CH1 333 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
HDAC9-208ENST00000417496 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 HSPA12AO43301 675 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 TXNL1O43396 289 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 OR10J5Q8NHC4 309 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 OR5P3Q8WZ94 311 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 APH1AQ96BI3 265 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 FAM173AQ9BQD7 235 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 RSG1Q9BU20 258 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 TTTY12Q9BZ98 90 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.44
HDAC9-208ENST00000417496 ESPL1Q14674 2120 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 C9orf172C9J069 976 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 HNF4GQ14541 408 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 OR1C1Q15619 314 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 NRN1LQ496H8 165 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 ABHD17BQ5VST6 288 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 ZNF324BQ6AW86 544 aaPredicted RBP12.33□□□□□ -0.44
HDAC9-208ENST00000417496 OR5A2Q8NGI9 324 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 PPP1R3CQ9UQK1 317 aa12.33□□□□□ -0.44
HDAC9-208ENST00000417496 A0A1W2PNU3 283 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 A0A1W2PR80 420 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 SYNGR4O95473 234 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 SERPINE2P07093 398 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 SELEP16581 610 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 TAGLN2P37802 199 aaKnown RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 RPS10P46783 165 aaKnown RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 ICAM4Q14773 271 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 AKR1C8PQ5T2L2 129 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms