RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 PSG2P11465 335 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 CD80P33681 288 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 MDH2P40926 338 aaKnown RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 ECI1P42126 302 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 Q6ZS49 121 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 CCDC28AQ8IWP9 274 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 CD177Q8N6Q3 437 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 KDF1Q8NAX2 398 aaPredicted RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 COQ8AQ8NI60 647 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 CA5BP1Q8WTZ4 195 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 RTN4IP1Q8WWV3 396 aaPredicted RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 TRAF4Q9BUZ4 470 aaPredicted RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 SLC2A9Q9NRM0 540 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 DECR2Q9NUI1 292 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 RASL12Q9NYN1 266 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 KIF25Q9UIL4 384 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 YLPM1P49750 1951 aaKnown RBP8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 CRYM-AS1A6NIL9 109 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 DBX1A6NMT0 343 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 SRRM5B3KS81 715 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 CYB5R3P00387 301 aaPredicted RBP8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR5AC1P0C628 307 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 M6PRP20645 277 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 PRDX2P32119 198 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 AP2S1P53680 142 aaPredicted RBP8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 EDDM3AQ14507 147 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF880Q6PDB4 577 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 DEFB108BQ8NET1 73 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR10J5Q8NHC4 309 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 ESRP2Q9H6T0 727 aaKnown RBP8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 NGBQ9NPG2 151 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 WIPI2Q9Y4P8 454 aa8.96□□□□□ -0.97
SMPD4P1-201ENST00000416717 CACNA1BQ00975 2339 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 IGKV1D-17A0A075B6S4 117 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 TRBV6-6A0A0A6YYG2 114 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 HSPA12AO43301 675 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 TNFSF12O43508 249 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 PLAUP00749 431 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 SFTPCP11686 197 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 CXCL2P19875 107 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 GNRHRP30968 328 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 HTR2BP41595 481 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 OR3A1P47881 315 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 GLIPR1P48060 266 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 SRSF7Q16629 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 FAM53AQ6NSI3 398 aaPredicted RBP8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 GSG1LQ6UXU4 331 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 ZNF565Q8N9K5 539 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 OR4A4PQ8NGN8 299 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 PPP1R1CQ8WVI7 109 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 RNASE6Q93091 150 aaKnown RBP8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 COQ2Q96H96 371 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 DCTN5Q9BTE1 182 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 SLC5A7Q9GZV3 580 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 TAF9BQ9HBM6 251 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 GCM1Q9NP62 436 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 ERRFI1Q9UJM3 462 aaPredicted RBP8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 HCFC1P51610 2035 aa8.96□□□□□ -0.98
SMPD4P1-201ENST00000416717 SHISA9B4DS77 424 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 KCNAB3O43448 404 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 TNFSF4P23510 183 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 LMO1P25800 156 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 KRBOX4Q5JUW0 171 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 NCMAPQ5T1S8 102 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 SLC51BQ86UW2 128 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 LDLRAD3Q86YD5 345 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 DMRTC2Q8IXT2 367 aaPredicted RBP8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 ZNRF1Q8ND25 227 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 MRGPRDQ8TDS7 321 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 NAA60Q9H7X0 242 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 CCL28Q9NRJ3 127 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 COMMD9Q9P000 198 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 GSKIPQ9P0R6 139 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 NDRG3Q9UGV2 375 aa8.95□□□□□ -0.98
SMPD4P1-201ENST00000416717 TMEM30CPA0ZSE6 113 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 B8ZZF3 427 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 E7EQL1 145 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 L7N2F9 121 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 SELLP14151 372 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 TLE1Q04724 770 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 LPCAT3Q6P1A2 487 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 MEX3BQ6ZN04 569 aaKnown RBP8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 ZNF818PQ6ZRF7 136 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 GAPTQ8N292 157 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 OR1L1Q8NH94 360 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 OR10C1Q96KK4 312 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 IL19Q9UHD0 177 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 PPP1R3CQ9UQK1 317 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 KCNIP3Q9Y2W7 256 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 TANC2Q9HCD6 1990 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 TRBV6-7A0A0A0MS04 114 aa8.94□□□□□ -0.98
SMPD4P1-201ENST00000416717 H7C1Q1 480 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms