RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 LIPKQ5VXJ0 399 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 OR10K2Q6IF99 312 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 TMEM91Q6ZNR0 172 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 Q96M66 194 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 GFI1Q99684 422 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 SELENOIQ9C0D9 397 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 WNK1Q9H4A3 2382 aa15.24■□□□□ 0.03
SF3A1-202ENST00000411423 A0A1W2PPI3 338 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 AMY1AP04745 511 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 AMY2AP04746 511 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 MAPK3P27361 379 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-202ENST00000411423 GPR176Q14439 515 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 CEACAM19Q7Z692 300 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 LYG1Q8N1E2 194 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 MS4A15Q8N5U1 240 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 NKAIN3Q8N8D7 197 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 TMEM203Q969S6 136 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 FAM46BQ96A09 425 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 UQCC2Q9BRT2 126 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 WNT10AQ9GZT5 417 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 MMP27Q9H306 513 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 TPRKBQ9Y3C4 175 aa15.23■□□□□ 0.03
SF3A1-202ENST00000411423 TET2Q6N021 2002 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-202ENST00000411423 IGHV3-43A0A0B4J1X8 118 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 RGS10O43665 173 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 CRTAPO75718 401 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-202ENST00000411423 UCHL1P09936 223 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 IGHV3-43DP0DP04 118 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 CD28P10747 220 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 CD37P11049 281 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 LOXL3P58215 753 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 RAB12Q6IQ22 244 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 GAPTQ8N292 157 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 OR10A7Q8NGE5 316 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 OR4K15Q8NH41 348 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 ARL11Q969Q4 196 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 RBMXL1Q96E39 390 aaKnown RBP15.22■□□□□ 0.03
SF3A1-202ENST00000411423 MRPS24Q96EL2 167 aaKnown RBP15.22■□□□□ 0.03
SF3A1-202ENST00000411423 OCSTAMPQ9BR26 566 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 PRSS22Q9GZN4 317 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 PCDHB16Q9NRJ7 776 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 PEX16Q9Y5Y5 336 aa15.22■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A18PA6NE21 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A16PA6NEW6 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A20PA6NIJ5 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A9PA6NNJ1 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A12PA8MX19 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A5PA8MXJ8 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 C12orf77C9JDV5 145 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 AIPO00170 330 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A15PP0C7V4 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A13PP0C7W8 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A14PP0C7W9 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM90A24PP0C7X0 464 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 VSIG8P0DPA2 414 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 GPR50Q13585 617 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 TPBGQ13641 420 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 RBM48Q5RL73 367 aaKnown RBP15.21■□□□□ 0.03
SF3A1-202ENST00000411423 C1orf100Q5SVJ3 147 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 C11orf88Q6PI97 169 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 Q6ZTK2 550 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 FAM110DQ8TAY7 271 aaPredicted RBP15.21■□□□□ 0.03
SF3A1-202ENST00000411423 THRSPQ92748 146 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 UFD1Q92890 307 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 CNBD2Q96M20 576 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 RBM14Q96PK6 669 aaKnown RBP15.21■□□□□ 0.03
SF3A1-202ENST00000411423 SLC25A33Q9BSK2 321 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 ETAA1Q9NY74 926 aa15.21■□□□□ 0.03
SF3A1-202ENST00000411423 UBE2QL1A1L167 161 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 MCRIP1C9JLW8 97 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 SLC31A2O15432 143 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 ATP6V1G2O95670 118 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 HSMCR30P0CW71 290 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 SRMP19623 302 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 GZMHP20718 246 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 BRS3P32247 399 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 CEACAM3P40198 252 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 QRFPP83859 136 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 UNC119Q13432 240 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 HSD17B12Q53GQ0 312 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 SYT6Q5T7P8 510 aaPredicted RBP15.2■□□□□ 0.02
SF3A1-202ENST00000411423 OR56B4Q8NH76 319 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 TOMM40LQ969M1 308 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 RPEQ96AT9 228 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 CCDC90BQ9GZT6 254 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 LIN7BQ9HAP6 207 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 GFOD1Q9NXC2 390 aa15.2■□□□□ 0.02
SF3A1-202ENST00000411423 FAM90A10PA6NDY2 464 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 FAM90A7PA6NKC0 464 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 ADARB2-AS1A8MUL3 147 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 FAM90A23PA8MXZ1 464 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 OOSP1A8MZH6 123 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 SDCBPO00560 298 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-202ENST00000411423 ORC5O43913 435 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 OR2F2O95006 317 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 MPIG6BO95866 241 aa15.19■□□□□ 0.02
SF3A1-202ENST00000411423 SNRNP70P08621 437 aaKnown RBP15.19■□□□□ 0.02
SF3A1-202ENST00000411423 RCC1P18754 421 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms