RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CD28P10747 220 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 MADCAM1Q13477 382 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 FBLN7Q53RD9 439 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 AWAT2Q6E213 333 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 ZNF497Q6ZNH5 498 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 THNSL2Q86YJ6 484 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 MS4A15Q8N5U1 240 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 NEK7Q8TDX7 302 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 NRG4Q8WWG1 115 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 UQCC2Q9BRT2 126 aa15.67■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A10PA6NDY2 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A18PA6NE21 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A16PA6NEW6 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A20PA6NIJ5 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A7PA6NKC0 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A9PA6NNJ1 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A12PA8MX19 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A5PA8MXJ8 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A23PA8MXZ1 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 MCRIP1C9JLW8 97 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 C15orf65H3BRN8 121 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 ORC5O43913 435 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A15PP0C7V4 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A13PP0C7W8 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A14PP0C7W9 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 FAM90A24PP0C7X0 464 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 GNG10P50151 68 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 AQP4P55087 323 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 EMX1Q04741 257 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 SPHARQ15513 63 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 ACSM3Q53FZ2 586 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 PDLIM3Q53GG5 364 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 UNQ9370/PRO34162Q6UXP9 181 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 OR52M1Q8NGK5 317 aa15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 LSM2Q9Y333 95 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-209ENST00000409543 M0QZK8 103 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 OPN1MWP04001 364 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 AMY1AP04745 511 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 AMY2AP04746 511 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 OPN1MW2P0DN77 364 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 OPN1MW3P0DN78 364 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 MGMTP16455 207 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 RAB7AP51149 207 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 GABPB1Q06547 395 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 TMEM95Q3KNT9 176 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 ABCA11PQ4W5N1 156 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 RAB12Q6IQ22 244 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 NDUFA11Q86Y39 141 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 LYG1Q8N1E2 194 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 TMEM104Q8NE00 496 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 OR10X1Q8NGY0 326 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 CCDC107Q8WV48 283 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 ARL11Q969Q4 196 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 SELENOIQ9C0D9 397 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 BANF2Q9H503 90 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 GHRLQ9UBU3 117 aa15.65■□□□□ 0.1
TSPAN4-209ENST00000409543 A0A1W2PPI3 338 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 H0YHG0 523 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 AIPO00170 330 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 GLAP06280 429 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 SLC35A2P78381 396 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 INSL4Q14641 139 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 IRF3Q14653 427 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 NSUN5P1Q3KNT7 163 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 OR8H3Q8N146 312 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 C8orf31Q8N9H6 132 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 Q96M66 194 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 CITED2Q99967 270 aaPredicted RBP15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 TPRKBQ9Y3C4 175 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 PEX16Q9Y5Y5 336 aa15.64■□□□□ 0.09
TSPAN4-209ENST00000409543 SDCBPO00560 298 aaPredicted RBP15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 CRTAPO75718 401 aaPredicted RBP15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 LPLP06858 475 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 SNRNP70P08621 437 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 GP2P55259 537 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 LOXL3P58215 753 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 GPR50Q13585 617 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 DIAPH2-AS1Q14236 149 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 GAPTQ8N292 157 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 LINC00311Q8N616 119 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 DRAM1Q8N682 238 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 OR5AU1Q8NGC0 362 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 OR56B4Q8NH76 319 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 PHYHIPQ92561 330 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 SGCDQ92629 289 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 TMED9Q9BVK6 235 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 DUSP21Q9H596 190 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 GFOD1Q9NXC2 390 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 ETAA1Q9NY74 926 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 TRAPPC2LQ9UL33 140 aa15.63■□□□□ 0.09
TSPAN4-209ENST00000409543 A0A1W2PPE3 182 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 ADARB2-AS1A8MUL3 147 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 CA11O75493 328 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 SC5DO75845 299 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 UBBP0CG47 229 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 FUT3P21217 361 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 MYF6P23409 242 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 MED22Q15528 200 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 Q3ZCU0 254 aa15.62■□□□□ 0.09
TSPAN4-209ENST00000409543 FAM27D1Q5T7N8 215 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms