RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 GLIPR1P48060 266 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 PLAC9Q5JTB6 97 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 RUSC1-AS1Q66K80 236 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 Q8N7P7 452 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 MCFD2Q8NI22 146 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 FAAP24Q9BTP7 215 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 C6orf62Q9GZU0 229 aaPredicted RBP17.03■□□□□ 0.32
C4orf48-201ENST00000409248 NCOR1P1Q9H4R4 102 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 UNKLQ9H9P5 680 aaKnown RBP17.03■□□□□ 0.32
C4orf48-201ENST00000409248 ZMAT3Q9HA38 289 aaKnown RBP17.03■□□□□ 0.32
C4orf48-201ENST00000409248 KIF25Q9UIL4 384 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 ADAM30Q9UKF2 790 aa17.03■□□□□ 0.32
C4orf48-201ENST00000409248 MEIKINA0A087WXM9 373 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 TRGV10A0A0A0MS01 117 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 FAM25AB3EWG3 89 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 FAM25CB3EWG5 89 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 FAM25GB3EWG6 89 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 RGS5O15539 181 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 HPGDSO60760 199 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 PRTN3P24158 256 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 TMEM200BQ69YZ2 307 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 ZNF497Q6ZNH5 498 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 TRAPPC6BQ86SZ2 158 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 DYRK2Q92630 601 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 OR6C3Q9NZP0 311 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 LINC00312Q9Y6C7 94 aa17.02■□□□□ 0.32
C4orf48-201ENST00000409248 SERPINE3A8MV23 424 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 MFNGO00587 321 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 EIF4EP06730 217 aaKnown RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 GNB3P16520 340 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 CDK2P24941 298 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 MRPS15P82914 257 aaKnown RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 RTN4RL2Q86UN3 420 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF48Q96MX3 618 aaPredicted RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 C19orf24Q9BVV8 132 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 NXF2Q9GZY0 626 aaKnown RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 CHMP1AQ9HD42 196 aaPredicted RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 AK3Q9UIJ7 227 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 UBE2J1Q9Y385 318 aaPredicted RBP17.01■□□□□ 0.31
C4orf48-201ENST00000409248 DSCAML1Q8TD84 2053 aa17.01■□□□□ 0.31
C4orf48-201ENST00000409248 TRAV18A0A075B6X5 111 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 MT-ND4P03905 459 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 GLP1RP43220 463 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 BAMBIQ13145 260 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF273Q14593 569 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 CDNFQ49AH0 187 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 TMEM69Q5SWH9 247 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 PDZD9Q8IXQ8 264 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 ZDHHC16Q969W1 377 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 CMSS1Q9BQ75 279 aaKnown RBP17■□□□□ 0.31
C4orf48-201ENST00000409248 RIMS4Q9H426 269 aaPredicted RBP17■□□□□ 0.31
C4orf48-201ENST00000409248 A3GALT2U3KPV4 340 aa17■□□□□ 0.31
C4orf48-201ENST00000409248 FBN1P35555 2871 aaKnown RBP17■□□□□ 0.31
C4orf48-201ENST00000409248 DNAJC9-AS1A6NH13 148 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 RNASEK-C17orf49H0YIS7 233 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 CTDSP2O14595 271 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 XRCC3O43542 346 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 RBP4P02753 201 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 GSTP1P09211 210 aaKnown RBP16.99■□□□□ 0.31
C4orf48-201ENST00000409248 CD3GP09693 182 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 CCL3L1P16619 93 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ELK1P19419 428 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ERVFRD-1P60508 538 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 KLRD1Q13241 179 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 TCF23Q7RTU1 214 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 GAPTQ8N292 157 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ZDHHC22Q8N966 263 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF565Q8N9K5 539 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 CORO2AQ92828 525 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 TNFRSF14Q92956 283 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 CYYR1Q96J86 154 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF714Q96N38 554 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 MMP27Q9H306 513 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 ESM1Q9NQ30 184 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 C12orf4Q9NQ89 552 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.99■□□□□ 0.31
C4orf48-201ENST00000409248 TRAPPC2LQ9UL33 140 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 KCNK7Q9Y2U2 307 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 COL6A5A8TX70 2615 aa16.99■□□□□ 0.31
C4orf48-201ENST00000409248 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF728P0DKX0 622 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 TALDO1P37837 337 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 MNDAP41218 407 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 UBE2E1P51965 193 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 UBA52P62987 128 aaKnown RBP16.98■□□□□ 0.31
C4orf48-201ENST00000409248 ARFRP1Q13795 201 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 ZNF260Q3ZCT1 412 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 LAX1Q8IWV1 398 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 IZUMO1Q8IYV9 350 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 OR13A1Q8NGR1 328 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 OR4K15Q8NH41 348 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 MRPL30Q8TCC3 161 aaKnown RBP16.98■□□□□ 0.31
C4orf48-201ENST00000409248 MRGPRDQ8TDS7 321 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 FAM216AQ8WUB2 273 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 CCDC107Q8WV48 283 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 GAL3ST2Q9H3Q3 398 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 HEXA-AS1Q9H8Q6 139 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 TAS2R3Q9NYW6 316 aa16.98■□□□□ 0.31
C4orf48-201ENST00000409248 MDFIC2A0A1B0GVS7 189 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms