RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 LRP5LA4QPB2 252 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 A8MXK9 166 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 ZNF732B4DXR9 585 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 INAFM1C9JVW0 142 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 TK1P04183 234 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 FGF2P09038 288 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RPS2P15880 293 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 FCGR2CP31995 323 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 HAAOP46952 286 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 PIGPP57054 158 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 IL24Q13007 206 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 ATXN7L3Q14CW9 347 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 IAH1Q2TAA2 248 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 ANKRD55Q3KP44 614 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 PIGYQ3MUY2 71 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 DMRTC1Q5HYR2 192 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 C9orf135Q5VTT2 229 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RTN4RL2Q86UN3 420 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 BAP18Q8IXM2 172 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RELL2Q8NC24 303 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 SLC30A7Q8NEW0 376 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 FAM222BQ8WU58 562 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RNF141Q8WVD5 230 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RSRP1Q9BUV0 290 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 RTL8AQ9BWD3 113 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 REG4Q9BYZ8 158 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 OPN3Q9H1Y3 402 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 CDH20Q9HBT6 801 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 GPR160Q9UJ42 338 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
SMARCB1-203ENST00000407082 HIVEP2P31629 2446 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 TRBV6-6A0A0A6YYG2 114 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 A8MXE2 369 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 MSTNO14793 375 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 SFTPBP07988 381 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 HOXB5P09067 269 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 PI3P19957 117 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 MDH2P40926 338 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 RND3P61587 244 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 CIARTQ8N365 385 aaPredicted RBP10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 ZNF565Q8N9K5 539 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 BVESQ8NE79 360 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 OR1S1Q8NH92 325 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 C17orf50Q8WW18 174 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 RTN4IP1Q8WWV3 396 aaPredicted RBP10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 LRRC46Q96FV0 321 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 RNF126Q9BV68 326 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 JKAMPQ9P055 326 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 GSKIPQ9P0R6 139 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 RCC2Q9P258 522 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 POLDIP2Q9Y2S7 368 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 TMED3Q9Y3Q3 217 aa10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 HRNRQ86YZ3 2850 aaPredicted RBP10.97□□□□□ -0.65
SMARCB1-203ENST00000407082 E5RGE8 158 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 ADAP1O75689 374 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 BCL3P20749 454 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 DUSP1P28562 367 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 GPM6AP51674 278 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 IL15RAQ13261 267 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 TMEM187Q14656 261 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 SHEQ5VZ18 495 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 FIP1L1Q6UN15 594 aaKnown RBP10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 FBXW12Q6X9E4 464 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 BEND4Q6ZU67 534 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 MOB1BQ7L9L4 216 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 CALHM1Q8IU99 346 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 NEK7Q8TDX7 302 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 TOMM40LQ969M1 308 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 MARC2Q969Z3 335 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 SLAMF9Q96A28 289 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 BOD1Q96IK1 185 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 ABHD14BQ96IU4 210 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 CXorf58Q96LI9 332 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 HDHD3Q9BSH5 251 aaPredicted RBP10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 IFT22Q9H7X7 185 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 Q9N2K0 584 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 TAS2R3Q9NYW6 316 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 PRSS50Q9UI38 385 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 NSG2Q9Y328 171 aa10.96□□□□□ -0.65
SMARCB1-203ENST00000407082 FREM1Q5H8C1 2179 aa10.96□□□□□ -0.66
SMARCB1-203ENST00000407082 IGKV1D-8A0A087WSZ0 117 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 RNF212BA8MTL3 300 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 TRDCB7Z8K6 153 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 J3QT63 122 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 K7EPK0 472 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 JTBO76095 146 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 ASCL1P50553 236 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 S100A10P60903 97 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 BLOC1S1P78537 153 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 MZT1Q08AG7 82 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 RAB32Q13637 225 aa10.95□□□□□ -0.66
SMARCB1-203ENST00000407082 GABRA6Q16445 453 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms