RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ZDHHC16Q969W1 377 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 Q96M66 194 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 RASL12Q9NYN1 266 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 V9GYS6 101 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 ANKRD11Q6UB99 2663 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 PTPN13Q12923 2485 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 A0A0G2JK05 382 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 A0A1W2PPE3 182 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 CLDN14O95500 239 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 CTSDP07339 412 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 KITLGP21583 273 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 IGFBP7Q16270 282 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 OR1S2Q8NGQ3 325 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 SLC2A9Q9NRM0 540 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 PLSCR4Q9NRQ2 329 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 B9A039 149 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 SSX5O60225 188 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 DUS4LO95620 317 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 RPL12P30050 165 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 APOBEC3AP31941 199 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 BLOC1S1P78537 153 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 TESK1Q15569 626 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 IGSF11Q5DX21 431 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 CLEC2AQ6UVW9 174 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 RBMS3Q6XE24 437 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 PINX1Q96BK5 328 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 WBP1Q96G27 269 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 ZNF107Q9UII5 783 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 DFFBO76075 338 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 HRASP01112 189 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 PRRX1P54821 245 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 FAM201AQ5SY85 155 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 NR2C2APQ86WQ0 139 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 ZCCHC24Q8N2G6 241 aaKnown RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 OR4A4PQ8NGN8 299 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 ERGIC1Q969X5 290 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 FAM212BQ9NTI7 297 aaPredicted RBP7.78□□□□□ -1.16
LIG4-202ENST00000405925 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
LIG4-202ENST00000405925 KIAA2026Q5HYC2 2103 aa7.77□□□□□ -1.16
LIG4-202ENST00000405925 MBD3L4A6NDZ8 208 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 MBD3L3A6NE82 208 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 MBD3L5A6NJ08 208 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 E5RGE8 158 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CST7O76096 145 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CRYZL1O95825 349 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 HPXP02790 462 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 SCTP09683 121 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CRYGSP22914 178 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 UNC119Q13432 240 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 MPPED2Q15777 294 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 VMA21Q3ZAQ7 101 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 IGFL3Q6UXB1 125 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ACOT7LQ6ZUV0 252 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 TBC1D26Q86UD7 250 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 RPRMLQ8N4K4 120 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 OR5T1Q8NG75 326 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 MBD3L2Q8NHZ7 208 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 NSG2Q9Y328 171 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 OR2W1Q9Y3N9 320 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 IGHV1-18A0A0C4DH31 117 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 INHBBP09529 407 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 SUB1P53999 127 aaKnown RBP eCLIP7.77□□□□□ -1.17
LIG4-202ENST00000405925 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 GGNBP1Q5YKI7 109 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CLEC18BQ6UXF7 455 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ZNF485Q8NCK3 441 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 AQP3Q92482 292 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 LYZL4Q96KX0 146 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 TMEM68Q96MH6 324 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 SLC35D1Q9NTN3 355 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CACNG5Q9UF02 275 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 KIAA1549LQ6ZVL6 1849 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 IGKV1-9A0A0C4DH69 117 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 A0A0G2JNJ9 132 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ODAMA1E959 279 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CLEC18AA5D8T8 446 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 H0YL77 283 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 MMP7P09237 267 aaPredicted RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 P2RY4P51582 365 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ATP5J2P56134 94 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 ERHP84090 104 aaKnown RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 IL24Q13007 206 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 COMMD7Q86VX2 200 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 SAXO1Q8IYX7 474 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 CLEC18CQ8NCF0 446 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 OR10P1Q8NGE3 313 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 PCGF1Q9BSM1 259 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 SH2D2AQ9NP31 389 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 Q9UFV3 132 aa7.77□□□□□ -1.17
LIG4-202ENST00000405925 STRAPQ9Y3F4 350 aaKnown RBP7.77□□□□□ -1.17
LIG4-202ENST00000405925 IGHV1-69-2A0A0G2JMI3 117 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms