RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ZNF880Q6PDB4 577 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 SLC23A3Q6PIS1 610 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF573Q86YE8 665 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 PSMF1Q92530 271 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 MUCL1Q96DR8 90 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 RAB40CQ96S21 281 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 ZPBPQ9BS86 351 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TAAR3PQ9P1P4 343 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 B4GALT7Q9UBV7 327 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 OR2W1Q9Y3N9 320 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 PATE3B3GLJ2 98 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 HLA-HP01893 362 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TDGF1P13385 188 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 EIF2S3P41091 472 aaKnown RBP9.17□□□□□ -0.94
CLIP4-204ENST00000404424 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TCEAL6Q6IPX3 200 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 SLC16A13Q7RTY0 426 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TUSC5Q8IXB3 177 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 TMEM217Q8N7C4 229 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 OR10G4Q8NGN3 311 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 OR10J5Q8NHC4 309 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 CT55Q8WUE5 264 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 POM121L2Q96KW2 1035 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 CABLES2Q9BTV7 478 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 PRDM6Q9NQX0 595 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 SIRT7Q9NRC8 400 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 CRIM1Q9NZV1 1036 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 IL36RNQ9UBH0 155 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 MPC1Q9Y5U8 109 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 RFNGQ9Y644 331 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 CNTRLQ7Z7A1 2325 aa9.17□□□□□ -0.94
CLIP4-204ENST00000404424 OR5B21A6NL26 309 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CD300LBA8K4G0 201 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 IFNA5P01569 189 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CCL2P13500 99 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 TAGLN2P37802 199 aaKnown RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CLDN18P56856 261 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 OR2B8PP59922 312 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 UBE2KP61086 200 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 HLA-DRB3P79483 266 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 PLP2Q04941 152 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF154Q13106 437 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ICAM4Q14773 271 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF324BQ6AW86 544 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 SPINK14Q6IE38 97 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 C5orf24Q7Z6I8 188 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF429Q86V71 674 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 H1FOOQ8IZA3 346 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 OR2M7Q8NG81 312 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CLDND2Q8NHS1 167 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 RAB39BQ96DA2 213 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 TVP23CQ96ET8 276 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF703Q9H7S9 590 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 WSB1Q9Y6I7 421 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ANKRD30BLA7E2S9 258 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 NPIPB11E5RHQ5 1161 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 HSPB6O14558 160 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 DEGS1O15121 323 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 TXNL1O43396 289 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 SYNGR1O43759 233 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 SERPINE2P07093 398 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 FABP1P07148 127 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 NQO2P16083 231 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 EPHA1P21709 976 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 GNG3P63215 75 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 SRYQ05066 204 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 HAGHQ16775 308 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 C9orf135Q5VTT2 229 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 GPR146Q96CH1 333 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 GPHA2Q96T91 129 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 PKIBQ9C010 78 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 TMPRSS5Q9H3S3 457 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 ZNF552Q9H707 407 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-204ENST00000404424 CALHM2Q9HA72 323 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 NIT2Q9NQR4 276 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 WDFY3Q8IZQ1 3526 aa9.16□□□□□ -0.94
CLIP4-204ENST00000404424 TNFSF12O43508 249 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 ACP1P24666 158 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 RUNX1Q01196 453 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 TIPARPQ7Z3E1 657 aaKnown RBP9.15□□□□□ -0.94
CLIP4-204ENST00000404424 FAM58AQ8N1B3 248 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 APH1AQ96BI3 265 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 THOC3Q96J01 351 aaKnown RBP9.15□□□□□ -0.94
CLIP4-204ENST00000404424 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 RNF150Q9ULK6 438 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 LOXL2Q9Y4K0 774 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 TRAV24A0A0B4J272 114 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 KIAA1324LA8MWY0 1029 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-204ENST00000404424 B4DEV8 164 aa9.15□□□□□ -0.94
CLIP4-204ENST00000404424 NEURL1O76050 574 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms