RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 EMX1Q04741 257 aaPredicted RBP10.64□□□□□ -0.71
SDF4-203ENST00000403997 GABPB1Q06547 395 aaPredicted RBP10.64□□□□□ -0.71
SDF4-203ENST00000403997 MADCAM1Q13477 382 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 ABCA11PQ4W5N1 156 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 PDLIM3Q53GG5 364 aaPredicted RBP10.64□□□□□ -0.71
SDF4-203ENST00000403997 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 SLC16A12Q6ZSM3 486 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 CENPVQ7Z7K6 275 aaPredicted RBP10.64□□□□□ -0.71
SDF4-203ENST00000403997 C1QL4Q86Z23 238 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 OR10X1Q8NGY0 326 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 THRSPQ92748 146 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 MRPS24Q96EL2 167 aaKnown RBP10.64□□□□□ -0.71
SDF4-203ENST00000403997 OCSTAMPQ9BR26 566 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 MND1Q9BWT6 205 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 SPACA1Q9HBV2 294 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 MEGF8Q7Z7M0 2845 aa10.64□□□□□ -0.71
SDF4-203ENST00000403997 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 AIPO00170 330 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 OPN1MWP04001 364 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 LPLP06858 475 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 OPN1MW2P0DN77 364 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 OPN1MW3P0DN78 364 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 AQP4P55087 323 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 INSL4Q14641 139 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 ACSM3Q53FZ2 586 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 RAB12Q6IQ22 244 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 ZNF497Q6ZNH5 498 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 DRAM1Q8N682 238 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 NKAIN3Q8N8D7 197 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 OR56B4Q8NH76 319 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 UBALD1Q8TB05 177 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
SDF4-203ENST00000403997 NRG4Q8WWG1 115 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 CITED2Q99967 270 aaPredicted RBP10.63□□□□□ -0.71
SDF4-203ENST00000403997 TMED9Q9BVK6 235 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 SELENOIQ9C0D9 397 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 TRAPPC2LQ9UL33 140 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 PEX16Q9Y5Y5 336 aa10.63□□□□□ -0.71
SDF4-203ENST00000403997 SH2D7A6NKC9 451 aaPredicted RBP10.62□□□□□ -0.71
SDF4-203ENST00000403997 H0YHG0 523 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 C15orf65H3BRN8 121 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 SDCBPO00560 298 aaPredicted RBP10.62□□□□□ -0.71
SDF4-203ENST00000403997 ORC5O43913 435 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 CRTAPO75718 401 aaPredicted RBP10.62□□□□□ -0.71
SDF4-203ENST00000403997 SNRNP70P08621 437 aaKnown RBP10.62□□□□□ -0.71
SDF4-203ENST00000403997 MGMTP16455 207 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 VHLP40337 213 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 RAB7AP51149 207 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 DIAPH2-AS1Q14236 149 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 HES1Q14469 280 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 SPHARQ15513 63 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 MED22Q15528 200 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 C9orf152Q5JTZ5 239 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 UNQ9370/PRO34162Q6UXP9 181 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 LYPD6Q86Y78 171 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 OR8H3Q8N146 312 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 TMEM104Q8NE00 496 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 OR5AU1Q8NGC0 362 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 OR4K15Q8NH41 348 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 SGCDQ92629 289 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 UQCC2Q9BRT2 126 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 ETAA1Q9NY74 926 aa10.62□□□□□ -0.71
SDF4-203ENST00000403997 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
SDF4-203ENST00000403997 IGHV3-43A0A0B4J1X8 118 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 A0A1W2PPI3 338 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A10PA6NDY2 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A7PA6NKC0 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A9PA6NNJ1 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A23PA8MXZ1 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 M0QZK8 103 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 AMY1AP04745 511 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 AMY2AP04746 511 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 IGHV3-43DP0DP04 118 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FUT3P21217 361 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 GPR50Q13585 617 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 HNF4GQ14541 408 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 FAM27D1Q5T7N8 215 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 SYT6Q5T7P8 510 aaPredicted RBP10.61□□□□□ -0.71
SDF4-203ENST00000403997 MOB3BQ86TA1 216 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 OR52M1Q8NGK5 317 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 GFOD1Q9NXC2 390 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 GHRLQ9UBU3 117 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 TPRKBQ9Y3C4 175 aa10.61□□□□□ -0.71
SDF4-203ENST00000403997 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 UBE2QL1A1L167 161 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms