RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CGB3P0DN86 165 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 CGB7P0DN87 165 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 PRSS3P35030 304 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 SSTR5P35346 364 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 DLX6P56179 175 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 CR1LQ2VPA4 569 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 FAHD2BQ6P2I3 314 aaPredicted RBP27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 ZNF880Q6PDB4 577 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 MAFIPQ8WZ33 124 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 FAHD2AQ96GK7 314 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 DMRTB1Q96MA1 342 aa27.36■■□□□ 1.97
CSNK1E-204ENST00000403904 PAX8Q06710 450 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 BAIAP2L2Q6UXY1 529 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 C5orf24Q7Z6I8 188 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 UBALD1Q8TB05 177 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 SOSTQ9BQB4 213 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 Q9N2K0 584 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 TAS2R3Q9NYW6 316 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 GZMHP20718 246 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 C17orf58Q2M2W7 97 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 FAM131AQ6UXB0 335 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 C11orf42Q8N5U0 333 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 GAL3ST2Q9H3Q3 398 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 CALYQ9NYX4 217 aa27.35■■□□□ 1.97
CSNK1E-204ENST00000403904 MEIS3P1A6NDR6 274 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 ZNF729A6NN14 1252 aaPredicted RBP27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 C12orf77C9JDV5 145 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 CD5LO43866 347 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 OMGP23515 440 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 GATA3P23771 443 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 C6orf183Q5T699 404 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 PRR18Q8N4B5 295 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 Q8N7P7 452 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 RFESDQ8TAC1 157 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 TAF9BQ9HBM6 251 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 V9GYH0 126 aa27.34■■□□□ 1.97
CSNK1E-204ENST00000403904 KBTBD11-OT1A0A1B0GTJ5 212 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 TPPPO94811 219 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 FOSL1P15407 271 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 DTYMKP23919 212 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 SPANXN2Q5MJ10 180 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 METTL11BQ5VVY1 283 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 PYHIN1Q6K0P9 492 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 MOB1BQ7L9L4 216 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 ARL11Q969Q4 196 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 ST6GALNAC5Q9BVH7 336 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 KCNIP1Q9NZI2 227 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 KPTNQ9Y664 436 aa27.33■■□□□ 1.97
CSNK1E-204ENST00000403904 RNASE12Q5GAN4 147 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-204ENST00000403904 KIR3DL3Q8N743 410 aa27.32■■□□□ 1.96
CSNK1E-204ENST00000403904 GVQW1Q8N7I0 195 aa27.32■■□□□ 1.96
CSNK1E-204ENST00000403904 C7orf69Q9H7B7 122 aa27.32■■□□□ 1.96
CSNK1E-204ENST00000403904 C17orf98A8MV24 154 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 C15orf65H3BRN8 121 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 M0R1W7 72 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 ORC5O43913 435 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 DLX1P56177 255 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 C15orf40Q8WUR7 153 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 TMPRSS13Q9BYE2 586 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 SIRPDQ9H106 197 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 OPN4Q9UHM6 478 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 POM121CA8CG34 1229 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 MMP23AO75900 390 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 FCER2P06734 321 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 ETV6P41212 452 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 PRAMEF5Q5TYX0 476 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 TRAT1Q6PIZ9 186 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 OCSTAMPQ9BR26 566 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 PCGF1Q9BSM1 259 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 RABL2AQ9UBK7 228 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 RABL2BQ9UNT1 228 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 AUP1Q9Y679 476 aa27.31■■□□□ 1.96
CSNK1E-204ENST00000403904 TOX4O94842 621 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 MMP9P14780 707 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 PRB3Q04118 309 aaPredicted RBP27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 OR1L1Q8NH94 360 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 GPX8Q8TED1 209 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 SIRT7Q9NRC8 400 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 KCNS2Q9ULS6 477 aa27.3■■□□□ 1.96
CSNK1E-204ENST00000403904 NPIPB11E5RHQ5 1161 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 LY6G6DO95868 133 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 HBZP02008 142 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 LPLP06858 475 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 GDNFP39905 211 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 HMGN3Q15651 99 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 LTC4SQ16873 150 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 ZNF782Q6ZMW2 699 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 C1orf122Q6ZSJ8 110 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 LINC00574Q9H8X3 128 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 SCPEP1Q9HB40 452 aa27.29■■□□□ 1.96
CSNK1E-204ENST00000403904 IGKV1D-8A0A087WSZ0 117 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 hCG_1809904A0A1W2PP81 198 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 A0A1W2PPE2 198 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 A0A1W2PR64 198 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 A0A1W2PRV1 198 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 HEPN1Q6WQI6 88 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 VMO1Q7Z5L0 202 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 ZNF554Q86TJ5 538 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 OR52I2Q8NH67 350 aa27.28■■□□□ 1.96
CSNK1E-204ENST00000403904 METTL8Q9H825 291 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms