RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 IGHV3-43DP0DP04 118 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PRKACBP22694 351 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 DAPP51397 102 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF134P52741 427 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ACTR3P61158 418 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF85Q03923 595 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TRIM25Q14258 630 aaKnown RBP9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GK3PQ14409 553 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TP53I3Q53FA7 332 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SLC16A12Q6ZSM3 486 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MINDY2Q8NBR6 621 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR13C9Q8NGT0 318 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CNIH3Q8TBE1 160 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CANT1Q8WVQ1 401 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SPSB1Q96BD6 273 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NR1H4Q96RI1 486 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MBOAT4Q96T53 435 aa9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RBMY1BA6NDE4 496 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RBMY1EA6NEQ0 496 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 LINC01619G3V211 115 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MT-ND2P03891 347 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RBMY1DP0C7P1 496 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C21orf33P30042 268 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PAX5Q02548 391 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C12orf73Q69YU5 71 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FAHD1Q6P587 224 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SAXO1Q8IYX7 474 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF439Q8NDP4 499 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CCDC54Q8NEL0 328 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR6Q1Q8NGQ2 317 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR2G2Q8NGZ5 317 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TMEM163Q8TC26 289 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IL4I1Q96RQ9 567 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NABP2Q9BQ15 211 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FAM110AQ9BQ89 295 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 THAP7Q9BT49 309 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FRRS1LQ9P0K9 344 aa9.11□□□□□ -0.95
SPTLC1P3-201ENST00000403408 SULT1C4O75897 302 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IGLV1-51P01701 117 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ANXA8P13928 327 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 MTNR1BP49286 362 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZSCAN26Q16670 478 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 LYPD6Q86Y78 171 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR10A7Q8NGE5 316 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ADI1Q9BV57 179 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 FAM107BQ9H098 131 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR51J1Q9H342 316 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZCCHC4Q9H5U6 513 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF556Q9HAH1 456 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GFOD1Q9NXC2 390 aa9.1□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZAR1LA6NP61 321 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 HSPA12AO43301 675 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR2T7P0C7T2 308 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 UBCP0CG48 685 aaKnown RBP9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TMEM225BP0DP42 221 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 EGR2P11161 476 aaPredicted RBP9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 BLVRBP30043 206 aaPredicted RBP9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ZNF137PP52743 207 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 GALEQ14376 348 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CT45A1Q5HYN5 189 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 ELP2Q6IA86 826 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 TMEM65Q6PI78 240 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 IL34Q6ZMJ4 242 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR10H4Q8NGA5 316 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 OR8H1Q8NGG4 311 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 CT45A3Q8NHU0 189 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 RHOFQ9HBH0 211 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 NEK6Q9HC98 313 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 PARP11Q9NR21 331 aa9.09□□□□□ -0.95
SPTLC1P3-201ENST00000403408 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 TRAV41A0A0B4J266 112 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 B2RBV5 119 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 IGHV3-11P01762 117 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 ISG15P05161 165 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 LGALS1P09382 135 aaKnown RBP9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 OR8U9P0C7N5 309 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 OR5H8P0DN80 308 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 ARSBP15848 533 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 ZNF20P17024 532 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 LSAMPQ13449 338 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 KISS1Q15726 138 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 TMEM244Q5VVB8 128 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 SLC25A48Q6ZT89 311 aaKnown RBP9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 C8orf31Q8N9H6 132 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 CCDC107Q8WV48 283 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 ARL11Q969Q4 196 aa9.08□□□□□ -0.96
SPTLC1P3-201ENST00000403408 CCDC124Q96CT7 223 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms