RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RCC2Q9P258 522 aaKnown RBP12.67□□□□□ -0.38
ATG4B-203ENST00000400772 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 OR2F2O95006 317 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 GZMHP20718 246 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 VHLP40337 213 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 SLC35A2P78381 396 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 ACSM3Q53FZ2 586 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 FAM27D1Q5T7N8 215 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 AWAT2Q6E213 333 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 FAM53AQ6NSI3 398 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-203ENST00000400772 ZNF497Q6ZNH5 498 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 SLC16A12Q6ZSM3 486 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 LYG1Q8N1E2 194 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 TMEM104Q8NE00 496 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 MYDGFQ969H8 173 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
ATG4B-203ENST00000400772 RBM14Q96PK6 669 aaKnown RBP12.66□□□□□ -0.38
ATG4B-203ENST00000400772 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
ATG4B-203ENST00000400772 A0A1W2PPE3 182 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 H3BUI4 141 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 MYF6P23409 242 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-203ENST00000400772 VDAC2P45880 294 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-203ENST00000400772 GNG10P50151 68 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 LOXL3P58215 753 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-203ENST00000400772 SPHARQ15513 63 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 SIGIRRQ6IA17 410 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 CCDC144NLQ6NUI1 221 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 LRRTM1Q86UE6 522 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 NKAIN3Q8N8D7 197 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 UBALD1Q8TB05 177 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 RPEQ96AT9 228 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 DUSP21Q9H596 190 aa12.65□□□□□ -0.38
ATG4B-203ENST00000400772 A0A1W2PPI3 338 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-203ENST00000400772 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 FBXO24O75426 580 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 SC5DO75845 299 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 MGMTP16455 207 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 MNDAP41218 407 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 GAPTQ8N292 157 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 CAPSLQ8WWF8 208 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 THRSPQ92748 146 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 TOMM40LQ969M1 308 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 Q96M66 194 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 CITED2Q99967 270 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-203ENST00000400772 TMED9Q9BVK6 235 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 SPACA1Q9HBV2 294 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 SCN3BQ9NY72 215 aa12.64□□□□□ -0.39
ATG4B-203ENST00000400772 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-203ENST00000400772 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
ATG4B-203ENST00000400772 MCRIP1C9JLW8 97 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 H0YHG0 523 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 AIPO00170 330 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 ORC5O43913 435 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-203ENST00000400772 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
ATG4B-203ENST00000400772 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 CD37P11049 281 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 MADCAM1Q13477 382 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 GPR50Q13585 617 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 MED22Q15528 200 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 PDLIM3Q53GG5 364 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-203ENST00000400772 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-203ENST00000400772 RAB12Q6IQ22 244 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 OR52M1Q8NGK5 317 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 OR56B4Q8NH76 319 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 NEK7Q8TDX7 302 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 ETAA1Q9NY74 926 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
ATG4B-203ENST00000400772 IGHV3-43A0A0B4J1X8 118 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 C12orf77C9JDV5 145 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 SDCBPO00560 298 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-203ENST00000400772 PEX14O75381 377 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 OPN1MWP04001 364 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 LPLP06858 475 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 OPN1MW2P0DN77 364 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 OPN1MW3P0DN78 364 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 IGHV3-43DP0DP04 118 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 NSUN5P1Q3KNT7 163 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 ARSJQ5FYB0 599 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-203ENST00000400772 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 C1QL4Q86Z23 238 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
ATG4B-203ENST00000400772 OR10X1Q8NGY0 326 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms