RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ADIRFQ15847 76 aa12□□□□□ -0.49
APOB-202ENST00000399256 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
APOB-202ENST00000399256 FADS6Q8N9I5 356 aa12□□□□□ -0.49
APOB-202ENST00000399256 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
APOB-202ENST00000399256 MRPS17Q9Y2R5 130 aaKnown RBP12□□□□□ -0.49
APOB-202ENST00000399256 TRAV1-1A0A0B4J248 108 aa12□□□□□ -0.49
APOB-202ENST00000399256 ZNF92Q03936 586 aa12□□□□□ -0.49
APOB-202ENST00000399256 ZNF468Q5VIY5 522 aaPredicted RBP12□□□□□ -0.49
APOB-202ENST00000399256 FAM27BQ5VT28 67 aa12□□□□□ -0.49
APOB-202ENST00000399256 ZNF611Q8N823 705 aa12□□□□□ -0.49
APOB-202ENST00000399256 FAM86C1Q9NVL1 165 aa12□□□□□ -0.49
APOB-202ENST00000399256 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
APOB-202ENST00000399256 DVL1O14640 695 aa12□□□□□ -0.49
APOB-202ENST00000399256 CYTIPO60759 359 aa12□□□□□ -0.49
APOB-202ENST00000399256 DFFBO76075 338 aa12□□□□□ -0.49
APOB-202ENST00000399256 B4GALT1P15291 398 aa12□□□□□ -0.49
APOB-202ENST00000399256 UCP1P25874 307 aa12□□□□□ -0.49
APOB-202ENST00000399256 PLA2G5P39877 138 aa12□□□□□ -0.49
APOB-202ENST00000399256 FUT6P51993 359 aa12□□□□□ -0.49
APOB-202ENST00000399256 HERPUD1Q15011 391 aa12□□□□□ -0.49
APOB-202ENST00000399256 P2RY6Q15077 328 aa12□□□□□ -0.49
APOB-202ENST00000399256 ZNF295-AS1Q8N0V1 137 aa12□□□□□ -0.49
APOB-202ENST00000399256 ZIC4Q8N9L1 334 aa12□□□□□ -0.49
APOB-202ENST00000399256 TSTD1Q8NFU3 115 aa12□□□□□ -0.49
APOB-202ENST00000399256 OR1P1Q8NH06 330 aa12□□□□□ -0.49
APOB-202ENST00000399256 DEFB126Q9BYW3 111 aa12□□□□□ -0.49
APOB-202ENST00000399256 WASF3Q9UPY6 502 aa12□□□□□ -0.49
APOB-202ENST00000399256 LAMP3Q9UQV4 416 aa12□□□□□ -0.49
APOB-202ENST00000399256 IGLV3-12A0A075B6K2 115 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 ZNF32P17041 273 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 SPCS3P61009 180 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 ERVS71-1P61550 626 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 C16orf82Q7Z2V1 217 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 OR2V1Q8NHB1 315 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 Q9N2K0 584 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 CHCHD2Q9Y6H1 151 aaPredicted RBP11.99□□□□□ -0.49
APOB-202ENST00000399256 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 TNFSF11O14788 317 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 TCAPO15273 167 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 ZNHIT1O43257 154 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 CELA2AP08217 269 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 IAPPP10997 89 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
APOB-202ENST00000399256 PIAS2O75928 621 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 BEND4Q6ZU67 534 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 HS3ST6Q96QI5 342 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 HIST1H2AAQ96QV6 131 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 OR6C1Q96RD1 312 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 RBKSQ9H477 322 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
APOB-202ENST00000399256 HNF4GQ14541 408 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 CARFQ8N187 725 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 OR51H1Q8NH63 302 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 NEK7Q8TDX7 302 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 ALKBH3Q96Q83 286 aaPredicted RBP11.98□□□□□ -0.49
APOB-202ENST00000399256 HIPK2Q9H2X6 1198 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 IL36RNQ9UBH0 155 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 OR14J1Q9UGF5 321 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
APOB-202ENST00000399256 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 EREGO14944 169 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 METTL15P1P0C7V9 234 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 ATG101Q9BSB4 218 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 NDUFAF3Q9BU61 184 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 DDA1Q9BW61 102 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 PLK3Q9H4B4 646 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 SCRG1O75711 98 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 IL18BPO95998 194 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 GZMHP20718 246 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 BCL3P20749 454 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 ARL16Q0P5N6 197 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 FOXO1Q12778 655 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 GPR137CQ8N3F9 429 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 FGFBP3Q8TAT2 258 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 SMIM7Q9BQ49 75 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 CHD3Q12873 2000 aaKnown RBP11.97□□□□□ -0.49
APOB-202ENST00000399256 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
APOB-202ENST00000399256 NTF4P34130 210 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 LBHQ53QV2 105 aaPredicted RBP11.97□□□□□ -0.49
APOB-202ENST00000399256 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 RABEPKQ7Z6M1 372 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 RNASEH2CQ8TDP1 164 aaKnown RBP11.97□□□□□ -0.49
APOB-202ENST00000399256 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
APOB-202ENST00000399256 IER2Q9BTL4 223 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 ABCA7Q8IZY2 2146 aa11.97□□□□□ -0.49
APOB-202ENST00000399256 DKK1O94907 266 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms