RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 C1QCP02747 245 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 GAPDHP04406 335 aaKnown RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 FOXA1P55317 472 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 PLGLAQ15195 96 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 ABHD17BQ5VST6 288 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 COMMD6Q7Z4G1 85 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 NOXO1Q8NFA2 376 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 GHSRQ92847 366 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 MRPL18Q9H0U6 180 aaKnown RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 PRTFDC1Q9NRG1 225 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 KLHDC2Q9Y2U9 406 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 F8WDY8 70 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 NAPSAO96009 420 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 AMY1AP04745 511 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 LTBRP36941 435 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 TRMT12Q53H54 448 aaKnown RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 LINC01551Q86U37 167 aa11.31□□□□□ -0.6
CCBE1-201ENST00000398179 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
CCBE1-201ENST00000398179 FAM72CH0Y354 149 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 RBM3P98179 157 aaKnown RBP11.3□□□□□ -0.6
CCBE1-201ENST00000398179 FAM72AQ5TYM5 149 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 FAM72DQ6L9T8 149 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 FAM72BQ86X60 149 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 RNF138Q8WVD3 245 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
CCBE1-201ENST00000398179 CES1P1Q9UKY3 287 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 MPC2O95563 127 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 GPX3P22352 226 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 GPR84Q9NQS5 396 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
CCBE1-201ENST00000398179 TXNDC8Q6A555 127 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 ZNF664Q8N3J9 261 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 DYNLRB2Q8TF09 96 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 ABHD14AQ9BUJ0 271 aa11.3□□□□□ -0.6
CCBE1-201ENST00000398179 SF3B6Q9Y3B4 125 aaKnown RBP11.3□□□□□ -0.6
CCBE1-201ENST00000398179 A0A0D9SEW6 157 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 FCGR2AP12318 317 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 NPPBP16860 134 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 CTXN1P60606 82 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 SLC25A40Q8TBP6 338 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 SLC25A2Q9BXI2 301 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 TUSC2O75896 110 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 FCGR2BP31994 310 aaPredicted RBP11.29□□□□□ -0.6
CCBE1-201ENST00000398179 OR1C1Q15619 314 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
CCBE1-201ENST00000398179 B9A039 149 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 LRRC61Q9BV99 259 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 NPIPB13A6NJU9 1138 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 NPIPB4C9JG80 1138 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 H7C1H1 209 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 ACRV1P26436 265 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 PSAPL1Q6NUJ1 521 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 DAZLQ92904 295 aaKnown RBP11.29□□□□□ -0.6
CCBE1-201ENST00000398179 FZD8Q9H461 694 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 ABHD4Q8TB40 342 aa11.29□□□□□ -0.6
CCBE1-201ENST00000398179 J3QW42 95 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 RS1O15537 224 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 GYPBP06028 91 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 GPX1P07203 203 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 CXCL5P42830 114 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 APOOQ9BUR5 198 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 SMOC2Q9H3U7 446 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 TMEM56-RWDD3S4R434 201 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 RICTORQ6R327 1708 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 H3BRM9 83 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 PTGESO14684 152 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 RIGQ13278 110 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 SDR39U1Q9NRG7 319 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-201ENST00000398179 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 FTSJ1Q9UET6 329 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 ZNF732B4DXR9 585 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-201ENST00000398179 NTN1O95631 604 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 MOSP00540 346 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 PRTN3P24158 256 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 LRRC25Q8N386 305 aaPredicted RBP11.28□□□□□ -0.6
CCBE1-201ENST00000398179 OR10G9Q8NGN4 311 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 NT5CQ8TCD5 201 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 PIGTQ969N2 578 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 MRGPRX3Q96LB0 322 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 FITM1A5D6W6 292 aa11.28□□□□□ -0.6
CCBE1-201ENST00000398179 RELBQ01201 579 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms