RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SSTR5P35346 364 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 TSPAN5P62079 268 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 HLA-DRB3P79483 266 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 CDK10Q15131 360 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 KIRREL1Q96J84 757 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 TMPRSS13Q9BYE2 586 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 MMP28Q9H239 520 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 KCNIP1Q9NZI2 227 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 CSMD1Q96PZ7 3565 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 KIR2DS1A0A191URI9 304 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 KIR2DS4P43632 304 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 MEF2DQ14814 521 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 KIR2DS1Q14954 304 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 MOB1BQ7L9L4 216 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 SPICQ8N5J4 248 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 RFESDQ8TAC1 157 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 FAM168AQ92567 244 aa17.57■□□□□ 0.4
CPNE1-204ENST00000397443 UNC79Q9P2D8 2635 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 DISC1C4P0D8 188 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 FSTL3O95633 263 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 SLC6A1P30531 599 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 OXA1LQ15070 435 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 TMEM155Q4W5P6 130 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 ACTBL2Q562R1 376 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 CLEC2AQ6UVW9 174 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 OR8B3Q8NGG8 313 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 OR8B2Q96RD0 313 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 BARX1Q9HBU1 254 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-204ENST00000397443 MBNL3Q9NUK0 354 aaKnown RBP17.56■□□□□ 0.4
CPNE1-204ENST00000397443 NECAP2Q9NVZ3 263 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 MIOXQ9UGB7 285 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 DSCAML1Q8TD84 2053 aa17.56■□□□□ 0.4
CPNE1-204ENST00000397443 YLPM1P49750 1951 aaKnown RBP17.55■□□□□ 0.4
CPNE1-204ENST00000397443 NAP1L6A6NFF2 107 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 C12orf77C9JDV5 145 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 ZNF735P0CB33 412 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 OR5H8P0DN80 308 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 TBPP20226 339 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 HERPUD1Q15011 391 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 LTC4SQ16873 150 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 CCBE1Q6UXH8 406 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-204ENST00000397443 NLRC3Q7RTR2 1065 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 OVCH2Q7RTZ1 564 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 OR1L1Q8NH94 360 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 CHPT1Q8WUD6 406 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 C19orf12Q9NSK7 152 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 IGKV1-6A0A0C4DH72 117 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 FUOMA2VDF0 154 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 PHF1O43189 567 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-204ENST00000397443 RPL31P62899 125 aaKnown RBP17.55■□□□□ 0.4
CPNE1-204ENST00000397443 PAX5Q02548 391 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 VAX1Q5SQQ9 334 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 IDO2Q6ZQW0 420 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 Q6ZS49 121 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 ZNF565Q8N9K5 539 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 ARL11Q969Q4 196 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 NEIL1Q96FI4 390 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-204ENST00000397443 DPAGT1Q9H3H5 408 aa17.55■□□□□ 0.4
CPNE1-204ENST00000397443 WNT2P09544 360 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 NFYAP23511 347 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-204ENST00000397443 OMGP23515 440 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 DNASE1P24855 282 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 ERP29P30040 261 aaKnown RBP17.54■□□□□ 0.4
CPNE1-204ENST00000397443 RAB25P57735 213 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 SRSF7Q16629 238 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■□□□□ 9.8
CPNE1-204ENST00000397443 C6orf183Q5T699 404 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 ZNF841Q6ZN19 808 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 FAM185AQ8N0U4 392 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 DEDD2Q8WXF8 326 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 PIMREGQ9BSJ6 248 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 GSX2Q9BZM3 304 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 CLN8Q9UBY8 286 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 SLC23A1Q9UHI7 598 aa17.54■□□□□ 0.4
CPNE1-204ENST00000397443 ARHGAP32A7KAX9 2087 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 TRGV10A0A0A0MS01 117 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 HBZP02008 142 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 PLA1AQ53H76 456 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 FAM53AQ6NSI3 398 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-204ENST00000397443 GINS4Q9BRT9 223 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 ZNF2Q9BSG1 426 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-204ENST00000397443 PATZ1Q9HBE1 687 aaKnown RBP17.53■□□□□ 0.4
CPNE1-204ENST00000397443 OR6C3Q9NZP0 311 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 OR1A1Q9P1Q5 309 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 SCP2D1Q9UJQ7 156 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 TRAV6A0A075B6T7 132 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 ZNF273Q14593 569 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 HMGN3Q15651 99 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 TCF23Q7RTU1 214 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 OR4A4PQ8NGN8 299 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 NUDT15Q9NV35 164 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 MGAT4AQ9UM21 535 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 FLVCR2Q9UPI3 526 aa17.53■□□□□ 0.4
CPNE1-204ENST00000397443 HSPA12AO43301 675 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 TCRBP04435 133 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 IL2RGP31785 369 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 FCGR2CP31995 323 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 NPY4RP50391 375 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 PLET1Q6UQ28 207 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 BTN2A1Q7KYR7 527 aa17.52■□□□□ 0.4
CPNE1-204ENST00000397443 OR6F1Q8NGZ6 308 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms