RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 CST7O76096 145 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 FAM106CPP0CH98 169 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 ALKBH6Q3KRA9 238 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 MMD2Q8IY49 270 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 JPT1Q9UK76 154 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 V9GYH0 126 aa13.64□□□□□ -0.23
GNE-202ENST00000396594 COL11A1P12107 1806 aaPredicted RBP13.64□□□□□ -0.23
GNE-202ENST00000396594 PRDX2P32119 198 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 GALR1P47211 349 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 BATF2Q8N1L9 274 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 FBXL17Q9UF56 701 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 SPAARA0A1B0GVQ0 90 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 TTRP02766 147 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 CEACAM1P13688 526 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 PMP22Q01453 160 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 PIMREGQ9BSJ6 248 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
GNE-202ENST00000396594 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 CCKARP32238 428 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 PCOLCEQ15113 449 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 IGKV1-8A0A0C4DH67 115 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 SLC31A2O15432 143 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 PTGDSP41222 190 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 UCP3P55916 312 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 UBE2L3P68036 154 aaKnown RBP13.63□□□□□ -0.23
GNE-202ENST00000396594 SRSF5Q13243 272 aaKnown RBP13.63□□□□□ -0.23
GNE-202ENST00000396594 SLC25A45Q8N413 288 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 TRAPPC1Q9Y5R8 145 aa13.63□□□□□ -0.23
GNE-202ENST00000396594 COX7A1P24310 79 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 AMTP48728 403 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
GNE-202ENST00000396594 ZNF788Q6ZQV5 615 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 CXorf67Q86X51 503 aaPredicted RBP13.62□□□□□ -0.23
GNE-202ENST00000396594 ABHD14AQ9BUJ0 271 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 TRBV5-7A0A0A0MS05 114 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 ZNF729A6NN14 1252 aaPredicted RBP13.62□□□□□ -0.23
GNE-202ENST00000396594 CDIPTO14735 213 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 NPY1RP25929 384 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
GNE-202ENST00000396594 HARBI1Q96MB7 349 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 CDC42EP3Q9UKI2 254 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 IGLV1-36A0A0B4J1U3 117 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 B9A039 149 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 RPL13AP40429 203 aaKnown RBP13.62□□□□□ -0.23
GNE-202ENST00000396594 UBTD1Q9HAC8 227 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 FAM87AP0C7U9 286 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 KCNK15Q9H427 330 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
GNE-202ENST00000396594 ARID2Q68CP9 1835 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 C7orf66A4D0T2 115 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 RBFOX3A6NFN3 312 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
GNE-202ENST00000396594 HIST1H3AP68431 136 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 TSPO2Q5TGU0 170 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 TINAGQ9UJW2 476 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 WASHC3Q9Y3C0 194 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 SAMD13Q5VXD3 122 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 CD200R1LQ6Q8B3 271 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.61□□□□□ -0.23
GNE-202ENST00000396594 MPZL1O95297 269 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 PSG4Q00888 419 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 TMEM97Q5BJF2 176 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 C10orf113Q5VZT2 155 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 COA4Q9NYJ1 87 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 RNF115Q9Y4L5 304 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 ZNF638Q14966 1978 aaKnown RBP13.61□□□□□ -0.23
GNE-202ENST00000396594 TGFBR1P36897 503 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 MVDP53602 400 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 TOLLIPQ9H0E2 274 aa13.61□□□□□ -0.23
GNE-202ENST00000396594 TMEM229AB2RXF0 380 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 AGFG2O95081 481 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 TMEM33P57088 247 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 HERVK_113P61574 105 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 SLC25A53Q5H9E4 307 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 GAPTQ8N292 157 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 PGLYRP3Q96LB9 341 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 TMEM218A2RU14 115 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 TOX4O94842 621 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 IGKV1D-16P01601 117 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
GNE-202ENST00000396594 RPL31P62899 125 aaKnown RBP13.6□□□□□ -0.23
GNE-202ENST00000396594 H1FOOQ8IZA3 346 aaPredicted RBP13.6□□□□□ -0.23
GNE-202ENST00000396594 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 LEUTXA8MZ59 168 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 FCGR3AP08637 254 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 TMEM52Q8NDY8 209 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 ZPLD1Q8TCW7 415 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 NEU4Q8WWR8 484 aaPredicted RBP13.6□□□□□ -0.23
GNE-202ENST00000396594 TMEM186Q96B77 213 aa13.6□□□□□ -0.23
GNE-202ENST00000396594 ZNF71Q9NQZ8 489 aaPredicted RBP13.6□□□□□ -0.23
GNE-202ENST00000396594 ZNF230Q9UIE0 474 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms