RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 CMTM1Q8IZ96 169 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 SLC35G3Q8N808 338 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 MSL2Q9HCI7 577 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 OR14J1Q9UGF5 321 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 CELSR3Q9NYQ7 3312 aa12.64□□□□□ -0.39
CBX3-202ENST00000396386 A0A1B0GWJ7 208 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 K7EPK0 472 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 HKR1P10072 659 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 WDR82Q6UXN9 313 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 C11orf53Q8IXP5 236 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 FAM71E2Q8N5Q1 922 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 MUCL1Q96DR8 90 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 SPEF1Q9Y4P9 236 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 TAAR5O14804 337 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
CBX3-202ENST00000396386 RPL12P30050 165 aaKnown RBP12.63□□□□□ -0.39
CBX3-202ENST00000396386 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
CBX3-202ENST00000396386 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 BAP18Q8IXM2 172 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 MBNL3Q9NUK0 354 aaKnown RBP12.63□□□□□ -0.39
CBX3-202ENST00000396386 OR1A1Q9P1Q5 309 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 WIPI2Q9Y4P8 454 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
CBX3-202ENST00000396386 TMEM30CPA0ZSE6 113 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 E5RGE8 158 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 H0Y980 276 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 WNT9BO14905 357 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 CDS2O95674 445 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 CRYAAP02489 173 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 TDGF1P3P51864 188 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 EIF5AP63241 154 aaKnown RBP12.62□□□□□ -0.39
CBX3-202ENST00000396386 HMGN3Q15651 99 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 ALKBH2Q6NS38 261 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 HSD17B13Q7Z5P4 300 aaPredicted RBP12.62□□□□□ -0.39
CBX3-202ENST00000396386 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 PLEKHA2Q9HB19 425 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 UFSP2Q9NUQ7 469 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 NSG2Q9Y328 171 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
CBX3-202ENST00000396386 FRYQ5TBA9 3013 aa12.62□□□□□ -0.39
CBX3-202ENST00000396386 ASPMQ8IZT6 3477 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 C1QTNF9BB2RNN3 333 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 PRRG2O14669 202 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 LMO1P25800 156 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 UCP1P25874 307 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 C1QTNF12Q5T7M4 302 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 OR10V1Q8NGI7 309 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 PRR7Q8TB68 274 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 LRRC20Q8TCA0 184 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 SHOXO15266 292 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 ZP3P21754 424 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 CD200P41217 278 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 TBR1Q16650 682 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
CBX3-202ENST00000396386 PRR18Q8N4B5 295 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 BVESQ8NE79 360 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 OR52M1Q8NGK5 317 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 OR5D13Q8NGL4 314 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 OR4D5Q8NGN0 318 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 IL22RA2Q969J5 263 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
CBX3-202ENST00000396386 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 ERRFI1Q9UJM3 462 aaPredicted RBP12.61□□□□□ -0.39
CBX3-202ENST00000396386 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
CBX3-202ENST00000396386 AKAP13Q12802 2813 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 SVILO95425 2214 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 HSPA12AO43301 675 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 PSPNO60542 156 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 PGLYRP1O75594 196 aaPredicted RBP12.6□□□□□ -0.39
CBX3-202ENST00000396386 FGF2P09038 288 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 ZNF250P15622 560 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 MSMPQ1L6U9 139 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 SLC35E4Q6ICL7 350 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
CBX3-202ENST00000396386 OR2Z1Q8NG97 314 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 DNTTIP1Q9H147 329 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 TAF9BQ9HBM6 251 aa12.6□□□□□ -0.39
CBX3-202ENST00000396386 BARX1Q9HBU1 254 aaPredicted RBP12.6□□□□□ -0.39
CBX3-202ENST00000396386 KCNIP1Q9NZI2 227 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms