RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 SPACA1Q9HBV2 294 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 OR5AC2Q9NZP5 309 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 PPP1R3CQ9UQK1 317 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 CD80P33681 288 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 GLRXP35754 106 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 OR3A1P47881 315 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 IZUMO4Q1ZYL8 232 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 MBNL2Q5VZF2 373 aaKnown RBP17.12■□□□□ 0.33
PRKCD-202ENST00000394729 ACP7Q6ZNF0 438 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 OR1L1Q8NH94 360 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 LSM5Q9Y4Y9 91 aaKnown RBP17.12■□□□□ 0.33
PRKCD-202ENST00000394729 CENPEQ02224 2701 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 DSCAMO60469 2012 aa17.12■□□□□ 0.33
PRKCD-202ENST00000394729 PMELP40967 661 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 EDDM3BP56851 147 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 UNQ6494/PRO21346Q6UXR6 183 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 FGFRL1Q8N441 504 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 LHFPL5Q8TAF8 219 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 THAP6Q8TBB0 222 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 MYOZ1Q9NP98 299 aaPredicted RBP17.11■□□□□ 0.33
PRKCD-202ENST00000394729 CTSDP07339 412 aaPredicted RBP17.11■□□□□ 0.33
PRKCD-202ENST00000394729 NHLRC3Q5JS37 347 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 FAM74A1Q5RGS3 127 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 C11orf87Q6NUJ2 197 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 MOB3AQ96BX8 217 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 H0YIZ8 118 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 ERVH48-1M5A8F1 160 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 S100A11P31949 105 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 UCNP55089 124 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 LINC00205P59089 165 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 NKX6-1P78426 367 aaPredicted RBP17.11■□□□□ 0.33
PRKCD-202ENST00000394729 FAHD2BQ6P2I3 314 aaPredicted RBP17.11■□□□□ 0.33
PRKCD-202ENST00000394729 TBC1D26Q86UD7 250 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 FAHD2AQ96GK7 314 aa17.11■□□□□ 0.33
PRKCD-202ENST00000394729 VRK1Q99986 396 aaPredicted RBP17.11■□□□□ 0.33
PRKCD-202ENST00000394729 OR4A8P0C604 315 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 DHODHQ02127 395 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 GNMTQ14749 295 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 CD177Q8N6Q3 437 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 POC1AQ8NBT0 407 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 DBX1A6NMT0 343 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 PLAUP00749 431 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 IL13RA2Q14627 380 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 GGNBP1Q5YKI7 109 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 PCSK4Q6UW60 755 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 ZNF808Q8N4W9 903 aaPredicted RBP17.1■□□□□ 0.33
PRKCD-202ENST00000394729 GCSAMQ8N6F7 178 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 OR52L2PQ8NGH6 319 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 NAA60Q9H7X0 242 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 KCNIP3Q9Y2W7 256 aa17.1■□□□□ 0.33
PRKCD-202ENST00000394729 KIR2DS1A0A191URI9 304 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A10PA6NDY2 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A18PA6NE21 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A16PA6NEW6 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 MSGN1A6NI15 193 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A20PA6NIJ5 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A8PA6NJQ4 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A7PA6NKC0 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 CEACAM18A8MTB9 384 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A22PA8MWA6 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A12PA8MX19 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A5PA8MXJ8 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A23PA8MXZ1 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A15PP0C7V4 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A13PP0C7W8 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A14PP0C7W9 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FAM90A24PP0C7X0 464 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 CEACAM6P40199 344 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 KIR2DS4P43632 304 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 SELENOVP59797 346 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 KIR2DS1Q14954 304 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 ZNF835Q9Y2P0 537 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 MEMO1Q9Y316 297 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 UBE2J1Q9Y385 318 aaPredicted RBP17.09■□□□□ 0.33
PRKCD-202ENST00000394729 TMEM210A6NLX4 147 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 PSMB6P28072 239 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 TNFAIP6P98066 277 aaPredicted RBP17.09■□□□□ 0.33
PRKCD-202ENST00000394729 KLRB1Q12918 225 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 ZNF146Q15072 292 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 TMEM268Q5VZI3 342 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 FIP1L1Q6UN15 594 aaKnown RBP17.09■□□□□ 0.33
PRKCD-202ENST00000394729 Q8IYB0 196 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 PRR7Q8TB68 274 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 GLYATL2Q8WU03 294 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 RRNAD1Q96FB5 475 aaKnown RBP17.09■□□□□ 0.33
PRKCD-202ENST00000394729 MEGF10Q96KG7 1140 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 ZC4H2Q9NQZ6 224 aa17.09■□□□□ 0.33
PRKCD-202ENST00000394729 ZNF250P15622 560 aa17.08■□□□□ 0.33
PRKCD-202ENST00000394729 HLA-DRB3P79483 266 aa17.08■□□□□ 0.33
PRKCD-202ENST00000394729 KRBOX4Q5JUW0 171 aa17.08■□□□□ 0.33
PRKCD-202ENST00000394729 ZNF471Q9BX82 626 aaPredicted RBP17.08■□□□□ 0.33
PRKCD-202ENST00000394729 OR2S2Q9NQN1 319 aa17.08■□□□□ 0.33
PRKCD-202ENST00000394729 VPS13CQ709C8 3753 aa17.08■□□□□ 0.33
PRKCD-202ENST00000394729 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.08■□□□□ 0.32
PRKCD-202ENST00000394729 PSG2P11465 335 aa17.08■□□□□ 0.32
PRKCD-202ENST00000394729 EPHA1P21709 976 aa17.08■□□□□ 0.32
PRKCD-202ENST00000394729 CASP6P55212 293 aa17.08■□□□□ 0.32
PRKCD-202ENST00000394729 COQ2Q96H96 371 aa17.08■□□□□ 0.32
PRKCD-202ENST00000394729 SMIM3Q9BZL3 60 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms