RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ATMQ13315 3056 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 PITX3O75364 302 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 NEURL1O76050 574 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 TMEM50AO95807 157 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 NGFP01138 241 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 IFNA4P05014 189 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 CLDN18P56856 261 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 ODF3L1Q8IXM7 274 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 TMEM252Q8N6L7 170 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 THOC3Q96J01 351 aaKnown RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 SIGLEC12Q96PQ1 595 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 HES7Q9BYE0 225 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 ZNF703Q9H7S9 590 aaPredicted RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 PLEKHF2Q9H8W4 249 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 CALHM2Q9HA72 323 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 SYNGR1O43759 233 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 SNRPEP62304 92 aaKnown RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 CCL20P78556 96 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 ZNF266Q14584 549 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 RNF212Q495C1 297 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 OR2M7Q8NG81 312 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 PBDC1Q9BVG4 233 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 ZNF552Q9H707 407 aaPredicted RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 LYRM2Q9NU23 88 aaPredicted RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 TPRP12270 2363 aaKnown RBP11.83□□□□□ -0.52
NEK4-202ENST00000383721 ACACBO00763 2458 aa11.83□□□□□ -0.52
NEK4-202ENST00000383721 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 CLEC18AA5D8T8 446 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 A6NLC8 198 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 HSD17B6O14756 317 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 SS18L1O75177 396 aaPredicted RBP11.82□□□□□ -0.52
NEK4-202ENST00000383721 UCP1P25874 307 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 MEOX2P50222 304 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 CLEC18CQ8NCF0 446 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 APOBEC3DQ96AK3 386 aaPredicted RBP11.82□□□□□ -0.52
NEK4-202ENST00000383721 RARRES2Q99969 163 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 KCNJ16Q9NPI9 418 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 ATP23Q9Y6H3 246 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 A0A1B0GW64 132 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 LINC01387J3KSC0 135 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 GPR37O15354 613 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 OR13C7P0DN81 318 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 ID3Q02535 119 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 CD300LFQ8TDQ1 290 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 NEK7Q8TDX7 302 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 FAM173AQ9BQD7 235 aa11.82□□□□□ -0.52
NEK4-202ENST00000383721 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 PRSS44E7EML9 344 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEK4-202ENST00000383721 CST7O76096 145 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 COX5BP10606 129 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 VDAC1P21796 283 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 C20orf204Q6ZNR8 217 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
NEK4-202ENST00000383721 OR5C1Q8NGR4 320 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 ABHD14BQ96IU4 210 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 ZNF488Q96MN9 340 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 MED13Q9UHV7 2174 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
NEK4-202ENST00000383721 NXPH3O95157 252 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 AGAP20933 346 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 VAMP2P63027 116 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 MKXQ8IYA7 352 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
NEK4-202ENST00000383721 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 C5orf52A6NGY3 159 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 FAM166BA8MTA8 275 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 C3orf80F5H4A9 247 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 TNFSF12O43508 249 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 LILRA1O75019 489 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 ARG1P05089 322 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 EPHA1P21709 976 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 SULT1A1P50225 295 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 DYNLT3P51808 116 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 RAB1AP62820 205 aa11.8□□□□□ -0.52
NEK4-202ENST00000383721 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms