RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 FAM90A18PA6NE21 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A16PA6NEW6 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A20PA6NIJ5 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A8PA6NJQ4 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 LRRC3CA6NJW4 275 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A7PA6NKC0 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A22PA8MWA6 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A12PA8MX19 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A5PA8MXJ8 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A23PA8MXZ1 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 PRR32B1ATL7 298 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 SYNGR3O43761 229 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A15PP0C7V4 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A13PP0C7W8 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A14PP0C7W9 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A24PP0C7X0 464 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 GAS1P54826 345 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 P2RX3P56373 397 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 CLDN18P56856 261 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 TMEM33P57088 247 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 C9orf62Q8N4C0 152 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 SDHCQ99643 169 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-203ENST00000380877 DHRS9Q9BPW9 319 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 PKDREJQ9NTG1 2253 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 IGSF11Q5DX21 431 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 KCNIP4Q6PIL6 250 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 Q96M66 194 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 PHYHD1Q5SRE7 291 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ABLIM2Q6H8Q1 611 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF407Q9C0G0 2248 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 MDFIC2A0A1B0GVS7 189 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 J3QRE1 110 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 OR2H2O95918 312 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 COL10A1Q03692 680 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 SLC38A11Q08AI6 406 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-203ENST00000380877 UBAC2Q8NBM4 344 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 CLDN16Q9Y5I7 305 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 CACNA1BQ00975 2339 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 NRN1LQ496H8 165 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 RPL7L1Q6DKI1 246 aaKnown RBP10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ABHD17AQ96GS6 310 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
GABPB1-203ENST00000380877 ESPL1Q14674 2120 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 A0A1B0GTI1 187 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 SYNGR2O43760 224 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 OR7C2O60412 319 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 CDS2O95674 445 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 LY86O95711 162 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 RRASP10301 218 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 SLC25A6P12236 298 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 KIR2DS2P43631 304 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 NPBWR2P48146 333 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PRRX1P54821 245 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 TAS2R45P59539 299 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 OR2B8PP59922 312 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 SEZ6L2Q6UXD5 910 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 ACY3Q96HD9 319 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 J3QW42 95 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 MGST3O14880 152 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PPP1CCP36873 323 aaKnown RBP10.55□□□□□ -0.72
GABPB1-203ENST00000380877 RPL35P42766 123 aaKnown RBP10.55□□□□□ -0.72
GABPB1-203ENST00000380877 S100A12P80511 92 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PXDC1Q5TGL8 231 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 MYO7BQ6PIF6 2116 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 NR2C2APQ86WQ0 139 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 MRGPRFQ96AM1 343 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 WDYHV1Q96HA8 205 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 GPR132Q9UNW8 380 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PPIAL4EA0A075B759 164 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PPIAL4DF5H284 164 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 B3GALNT1O75752 331 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 SCTP09683 121 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PPIAL4FP0DN26 164 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 AANATQ16613 207 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 LGALSLQ3ZCW2 172 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-203ENST00000380877 FAM219AQ8IW50 185 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PHYHIPLQ96FC7 376 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 RHOFQ9HBH0 211 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-203ENST00000380877 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 PPIAL4AQ9Y536 164 aa10.55□□□□□ -0.72
GABPB1-203ENST00000380877 A0A087WV48 116 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms