RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 BATF3Q9NR55 127 aa10.39□□□□□ -0.75
SMN2-203ENST00000380743 SERPINE3A8MV23 424 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 C17orf98A8MV24 154 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 MMP23AO75900 390 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 PTHLHP12272 177 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 SSTR5P35346 364 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 HACD4Q5VWC8 232 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 VMO1Q7Z5L0 202 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 TBX15Q96SF7 602 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 CMSS1Q9BQ75 279 aaKnown RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 CHMP1AQ9HD42 196 aaPredicted RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 C12orf4Q9NQ89 552 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMN2-203ENST00000380743 SIRT7Q9NRC8 400 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 TAS2R3Q9NYW6 316 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 TRAPPC2LQ9UL33 140 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 KBTBD11-OT1A0A1B0GTJ5 212 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 FAM25AB3EWG3 89 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 FAM25CB3EWG5 89 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 FAM25GB3EWG6 89 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 GSTP1P09211 210 aaKnown RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 CD3GP09693 182 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 GZMHP20718 246 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 OMGP23515 440 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 MADCAM1Q13477 382 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 RFESDQ8TAC1 157 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 UPRTQ96BW1 309 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 RIMS4Q9H426 269 aaPredicted RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 METTL8Q9H825 291 aaKnown RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 LINC00574Q9H8X3 128 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
SMN2-203ENST00000380743 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
SMN2-203ENST00000380743 SETD2Q9BYW2 2564 aaPredicted RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 TRBV6-6A0A0A6YYG2 114 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 ZNF729A6NN14 1252 aaPredicted RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 C15orf65H3BRN8 121 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 RBP4P02753 201 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 MELTFP08582 738 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 IGHV1-8P0DP01 117 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 PRTN3P24158 256 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 GDNFP39905 211 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 TAS2R20P59543 309 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 ARFRP1Q13795 201 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 PRAMEF5Q5TYX0 476 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 ZNF880Q6PDB4 577 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 PDZD9Q8IXQ8 264 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 UBALD1Q8TB05 177 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 SETD6Q8TBK2 473 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 NUDCD2Q8WVJ2 157 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 TNFRSF14Q92956 283 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 MMP27Q9H306 513 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
SMN2-203ENST00000380743 ZNF230Q9UIE0 474 aaPredicted RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 MRPS7Q9Y2R9 242 aaKnown RBP10.37□□□□□ -0.75
SMN2-203ENST00000380743 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
SMN2-203ENST00000380743 hCG_1809904A0A1W2PP81 198 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 A0A1W2PPE2 198 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 A0A1W2PR64 198 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 A0A1W2PRV1 198 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 INAFM1C9JVW0 142 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 ORC5O43913 435 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 SSX5O60225 188 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 CLPXO76031 633 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 HLA-DQB1P01920 261 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 FCGR3AP08637 254 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 MRPS15P82914 257 aaKnown RBP10.36□□□□□ -0.75
SMN2-203ENST00000380743 PNLIPRP3Q17RR3 467 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 CNPY1Q3B7I2 92 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
SMN2-203ENST00000380743 UTF1Q5T230 341 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 C6orf183Q5T699 404 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 CNIH2Q6PI25 160 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 BAIAP2L2Q6UXY1 529 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 HEPN1Q6WQI6 88 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 PRR18Q8N4B5 295 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 GCDHQ92947 438 aaPredicted RBP10.36□□□□□ -0.75
SMN2-203ENST00000380743 LHX4Q969G2 390 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 TAF9BQ9HBM6 251 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 Q9N2K0 584 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 EXTL2Q9UBQ6 330 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 A3GALT2U3KPV4 340 aa10.36□□□□□ -0.75
SMN2-203ENST00000380743 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
SMN2-203ENST00000380743 CENPVL3A0A0U1RRI6 287 aa10.35□□□□□ -0.75
SMN2-203ENST00000380743 RNASEK-C17orf49H0YIS7 233 aa10.35□□□□□ -0.75
SMN2-203ENST00000380743 FSHBP01225 129 aa10.35□□□□□ -0.75
SMN2-203ENST00000380743 HBZP02008 142 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms