RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.28□□□□□ -1.4
DDX58-202ENST00000379883 GJC3Q8NFK1 279 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 OR5D13Q8NGL4 314 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 OR11L1Q8NGX0 322 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 ELSPBP1Q96BH3 223 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 TXNDC17Q9BRA2 123 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 HDHD3Q9BSH5 251 aaPredicted RBP6.28□□□□□ -1.4
DDX58-202ENST00000379883 IGKV1D-8A0A087WSZ0 117 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 TNFSF12O43508 249 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 HNRNPA1P09651 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
DDX58-202ENST00000379883 MMDQ15546 238 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 LRRC75BQ2VPJ9 315 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 TMPRSS7Q7RTY8 843 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 CRIPAKQ8N1N5 446 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 OSR2Q8N2R0 312 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 PNKDQ8N490 385 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 MED29Q9NX70 200 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 HEATR5BQ9P2D3 2071 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 PRR19A6NJB7 356 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 ATXN7O15265 892 aaPredicted RBP6.28□□□□□ -1.4
DDX58-202ENST00000379883 CARD18P57730 90 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
DDX58-202ENST00000379883 SHBQ15464 509 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 SCARF2Q96GP6 870 aaPredicted RBP6.28□□□□□ -1.4
DDX58-202ENST00000379883 RSG1Q9BU20 258 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 C11orf1Q9H5F2 150 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
DDX58-202ENST00000379883 THSD7BQ9C0I4 1608 aa6.28□□□□□ -1.4
DDX58-202ENST00000379883 F5H5K5 113 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 H0Y980 276 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 NPIPB7O75200 414 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 PDCD6O75340 191 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 OR2J2O76002 312 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.4
DDX58-202ENST00000379883 TPTE2P1Q5T6R2 138 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 RFNGQ9Y644 331 aa6.27□□□□□ -1.4
DDX58-202ENST00000379883 KIAA1549LQ6ZVL6 1849 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 KIR2DS5A0A0G2JLQ3 304 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 A0A0G2JNG1 304 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 KIR2DS3K7RE56 304 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SLC33A1O00400 549 aaPredicted RBP6.27□□□□□ -1.41
DDX58-202ENST00000379883 FOXS1O43638 330 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SYNGR2O43760 224 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 ZNF253O75346 499 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 DRD3P35462 400 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 KIR2DS5Q14953 304 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 EXT1Q16394 746 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 STUMQ69YW2 141 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SP5Q6BEB4 398 aaPredicted RBP6.27□□□□□ -1.41
DDX58-202ENST00000379883 PRR27Q6MZM9 219 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 LINC01551Q86U37 167 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 YAF2Q8IY57 180 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 C1orf174Q8IYL3 243 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 FAM58AQ8N1B3 248 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 TMEM256Q8N2U0 113 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 D2HGDHQ8N465 521 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SGMS2Q8NHU3 365 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 FLVCR1-AS1Q8TAF5 88 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 FAM103A1Q9BTL3 118 aaKnown RBP6.27□□□□□ -1.41
DDX58-202ENST00000379883 MS4A18H0YCH9 400 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 CCL25O15444 150 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 TOMM40O96008 361 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 MT-ND6P03923 174 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 HLA-DOBP13765 273 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 FAHP16930 419 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 EPHA8P29322 1005 aaPredicted RBP6.27□□□□□ -1.41
DDX58-202ENST00000379883 TCTN1Q2MV58 587 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 MS4A18Q3C1V0 323 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 C19orf35Q6ZS72 473 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 DYRK2Q92630 601 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SCN2AQ99250 2005 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 SHISA7A6NL88 538 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 C11orf94C9JXX5 98 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 FCN1O00602 326 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 DEGS1O15121 323 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 LILRA1O75019 489 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 LILRB3O75022 631 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 TNFP01375 233 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 UCP1P25874 307 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 MFAP5Q13361 173 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 DEFB110Q30KQ9 67 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 OR10G8Q8NGN5 311 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
DDX58-202ENST00000379883 IGKV1-9A0A0C4DH69 117 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 NXPH3O95157 252 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 CXCL10P02778 98 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 ESDP10768 282 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 YPEL3P61236 119 aaPredicted RBP6.26□□□□□ -1.41
DDX58-202ENST00000379883 RPL15P61313 204 aaKnown RBP6.26□□□□□ -1.41
DDX58-202ENST00000379883 ARF1P84077 181 aaKnown RBP6.26□□□□□ -1.41
DDX58-202ENST00000379883 SLC38A11Q08AI6 406 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 C17orf67Q0P5P2 114 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 RTP5Q14D33 572 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 CARD17Q5XLA6 110 aa6.26□□□□□ -1.41
DDX58-202ENST00000379883 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms