RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FDCSPQ8NFU4 85 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 OR52L2PQ8NGH6 319 aa15.54■□□□□ 0.08
CLSTN1-202ENST00000377298 P2RY1P47900 373 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 COL10A1Q03692 680 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 DOLPP1Q86YN1 238 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 PHYHIPLQ96FC7 376 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 MS4A3Q96HJ5 214 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 AMELYQ99218 206 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 SRXN1Q9BYN0 137 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 NXF2Q9GZY0 626 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 LPAR2Q9HBW0 351 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 LHFPL6Q9Y693 200 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 IFNL4K9M1U5 179 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 MIDNQ504T8 468 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 CCDC144NLQ6NUI1 221 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 MRPL22Q9NWU5 206 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 FBXL17Q9UF56 701 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 PSME4Q14997 1843 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 IGHMP01871 453 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 SPINK9Q5DT21 86 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 CTDSP1Q9GZU7 261 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 GP6Q9HCN6 339 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 C1QTNF12Q5T7M4 302 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 BCL2L2Q92843 193 aaPredicted RBP15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 MARS2Q96GW9 593 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 SH2D2AQ9NP31 389 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 ZDHHC8Q9ULC8 765 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 A0A0G2JMZ2 1700 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 LRRC37A2A6NM11 1700 aa15.53■□□□□ 0.08
CLSTN1-202ENST00000377298 TDRD6O60522 2096 aaKnown RBP15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 SERTM2A0A1B0GWG4 89 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 MAP1LC3B2A6NCE7 125 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 RECKO95980 971 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 FAM3AP98173 230 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 GUK1Q16774 197 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 NECAP1Q8NC96 275 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 OR2V2Q96R30 315 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 MAP1LC3BQ9GZQ8 125 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 Q9N2K0 584 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 SVILO95425 2214 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 DHRS7CA6NNS2 312 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 CDS2O95674 445 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 SPNS3Q6ZMD2 512 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 C9orf62Q8N4C0 152 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 ZNF488Q96MN9 340 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 RNF2Q99496 336 aa15.52■□□□□ 0.08
CLSTN1-202ENST00000377298 KLRB1Q12918 225 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM162BQ5T6X4 162 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 DTD1Q8TEA8 209 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 FBLIM1Q8WUP2 373 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 OR1A1Q9P1Q5 309 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 RNASEK-C17orf49H0YIS7 233 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 ADRA2AP08913 450 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 SMIM17P0DL12 118 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 TMEM208Q9BTX3 173 aa15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 CHCHD2Q9Y6H1 151 aaPredicted RBP15.52■□□□□ 0.07
CLSTN1-202ENST00000377298 TRAV39A0A0B4J263 110 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 DBX1A6NMT0 343 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 HARBI1Q96MB7 349 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 TIMP4Q99727 224 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 CISD1Q9NZ45 108 aaKnown RBP15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 TMEM229AB2RXF0 380 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 CDC34P49427 236 aaPredicted RBP15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 PGLYRP3Q96LB9 341 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A10PA6NDY2 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A18PA6NE21 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A16PA6NEW6 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A20PA6NIJ5 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A8PA6NJQ4 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A7PA6NKC0 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A22PA8MWA6 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A12PA8MX19 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A5PA8MXJ8 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A23PA8MXZ1 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 SYNGR1O43759 233 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A15PP0C7V4 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A13PP0C7W8 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A14PP0C7W9 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM90A24PP0C7X0 464 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 TMEM33P57088 247 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF561Q8N587 486 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 OR8G5Q8NG78 346 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 PRDM14Q9GZV8 571 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 H0Y8G0 127 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 MMP26Q9NRE1 261 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 RSPO4Q2I0M5 234 aaPredicted RBP15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM219AQ8IW50 185 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 PKIBQ9C010 78 aa15.51■□□□□ 0.07
CLSTN1-202ENST00000377298 FCGR3AP08637 254 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 CXCL3P19876 107 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 CHST1O43916 411 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 SOX15O60248 233 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 ERVFRD-1P60508 538 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 H3F3AP84243 136 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 C10orf128Q5T292 105 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF596Q8TC21 504 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 PTPRFP10586 1907 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 DUXBA0A1W2PPF3 345 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 SEZ6L2Q6UXD5 910 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 OR10G4Q8NGN3 311 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms