RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ZNF610Q8N9Z0 462 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 OR4D5Q8NGN0 318 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 ERGIC1Q969X5 290 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 BOD1Q96IK1 185 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 OPN3Q9H1Y3 402 aaPredicted RBP17.14■□□□□ 0.33
VSX1-202ENST00000376709 DKK4Q9UBT3 224 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 TRAPPC2LQ9UL33 140 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 PTPRZ1P23471 2315 aaPredicted RBP17.14■□□□□ 0.33
VSX1-202ENST00000376709 GTF3C1Q12789 2109 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 SH2D1BO14796 132 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 FBXO24O75426 580 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 TNFSF13O75888 250 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 CECR9P0C854 216 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 DEFA5Q01523 94 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 MOB1BQ7L9L4 216 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 SPIN2AQ99865 258 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 SPIN2BQ9BPZ2 258 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 CABLES2Q9BTV7 478 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 GLS2Q9UI32 602 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 ERRFI1Q9UJM3 462 aaPredicted RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 POMT1Q9Y6A1 747 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 DCHS1Q96JQ0 3298 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 TRAV39A0A0B4J263 110 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 NUPL2O15504 423 aaKnown RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 GPR137BO60478 399 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 P2RY1P47900 373 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 ZNF146Q15072 292 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 GPR157Q5UAW9 335 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 ZNF324BQ6AW86 544 aaPredicted RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 FIP1L1Q6UN15 594 aaKnown RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 ZNF497Q6ZNH5 498 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 H1FOOQ8IZA3 346 aaPredicted RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 SELENOHQ8IZQ5 122 aaKnown RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 OR8G5Q8NG78 346 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 PLPPR1Q8TBJ4 325 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 LRRC46Q96FV0 321 aa17.13■□□□□ 0.33
VSX1-202ENST00000376709 PURGQ9UJV8 347 aaKnown RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 RCL1Q9Y2P8 373 aaKnown RBP17.13■□□□□ 0.33
VSX1-202ENST00000376709 PRR14LQ5THK1 2151 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 IGFL3Q6UXB1 125 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 STARD4Q96DR4 205 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 OR14J1Q9UGF5 321 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 SPTBN2O15020 2390 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 K7EM74 188 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 MLNRO43193 412 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 TIMM8AO60220 97 aaPredicted RBP17.12■□□□□ 0.33
VSX1-202ENST00000376709 MED6O75586 246 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 PGLYRP1O75594 196 aaPredicted RBP17.12■□□□□ 0.33
VSX1-202ENST00000376709 UCP1P25874 307 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 TAGLNQ01995 201 aaKnown RBP17.12■□□□□ 0.33
VSX1-202ENST00000376709 UBAC2Q8NBM4 344 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 SAT2Q96F10 170 aaPredicted RBP17.12■□□□□ 0.33
VSX1-202ENST00000376709 MMP26Q9NRE1 261 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 OR1A1Q9P1Q5 309 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 FZR1Q9UM11 496 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
VSX1-202ENST00000376709 NUDT19A8MXV4 375 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 H0Y980 276 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 HSPA12AO43301 675 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 ADAM20O43506 726 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 NKX2-1P43699 371 aaPredicted RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 P2RY6Q15077 328 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 MST1LQ2TV78 715 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 LILRB1Q8NHL6 650 aaPredicted RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 BCL2L14Q9BZR8 327 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 HRH4Q9H3N8 390 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 ZNF71Q9NQZ8 489 aaPredicted RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 TAAR3PQ9P1P4 343 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 ZDHHC8Q9ULC8 765 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 DMXL2Q8TDJ6 3036 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 ANKRD11Q6UB99 2663 aaPredicted RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 DUXBA0A1W2PPF3 345 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 FABP6P51161 128 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 SRSF3P84103 164 aaKnown RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 SHEQ5VZ18 495 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 BHLHA15Q7RTS1 189 aaPredicted RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 SNIP1Q8TAD8 396 aaKnown RBP17.11■□□□□ 0.33
VSX1-202ENST00000376709 SMIM8Q96KF7 97 aa17.11■□□□□ 0.33
VSX1-202ENST00000376709 BORCS7-ASMTA0A0B4J1R7 106 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 A6NLC8 198 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 HAND1O96004 215 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 VDAC1P21796 283 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 F2RP25116 425 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 GCH1P30793 250 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 EIF2S3P41091 472 aaKnown RBP17.1■□□□□ 0.33
VSX1-202ENST00000376709 ZNF273Q14593 569 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 DMBX1Q8NFW5 382 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 OR5D13Q8NGL4 314 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 BSCL2Q96G97 398 aaPredicted RBP17.1■□□□□ 0.33
VSX1-202ENST00000376709 LUZP4Q9P127 313 aa17.1■□□□□ 0.33
VSX1-202ENST00000376709 MBD3L4A6NDZ8 208 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 MBD3L3A6NE82 208 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 MBD3L5A6NJ08 208 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 NPIPB11E5RHQ5 1161 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 ABCD4O14678 606 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 CGAP01215 116 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 PVALBP20472 110 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 TUBG1P23258 451 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 CEBPDP49716 269 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms