RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 ZNF732B4DXR9 585 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 KHDC3LQ587J8 217 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 BEND4Q6ZU67 534 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 Q8NFD4 153 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 SSX3Q99909 188 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 OR51B6Q9H340 312 aa11.96□□□□□ -0.49
MSH5-202ENST00000375740 CRYM-AS1A6NIL9 109 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 CD300LBA8K4G0 201 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BKO60814 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BJP06899 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BOP23527 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BBP33778 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 APLNRP35414 380 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 RBMXP38159 391 aaKnown RBP11.96□□□□□ -0.5
MSH5-202ENST00000375740 WNT5AP41221 380 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BDP58876 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BCP62807 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST2H2BEQ16778 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.96□□□□□ -0.5
MSH5-202ENST00000375740 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BHQ93079 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BNQ99877 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2BMQ99879 126 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 ZNF286AQ9HBT8 521 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 DNAJB11Q9UBS4 358 aa11.96□□□□□ -0.5
MSH5-202ENST00000375740 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
MSH5-202ENST00000375740 ZNF728P0DKX0 622 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 CLN3Q13286 438 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 FDCSPQ8NFU4 85 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 MUCL1Q96DR8 90 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 KCNJ16Q9NPI9 418 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 C1orf123Q9NWV4 160 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
MSH5-202ENST00000375740 MAS1LP35410 378 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 PIGPP57054 158 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 FXYD4P59646 89 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 RHEBQ15382 184 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 MDP1Q86V88 176 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 SAXO1Q8IYX7 474 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 RBM14Q96PK6 669 aaKnown RBP11.95□□□□□ -0.5
MSH5-202ENST00000375740 HIST1H2AAQ96QV6 131 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 ASCL3Q9NQ33 180 aa11.95□□□□□ -0.5
MSH5-202ENST00000375740 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
MSH5-202ENST00000375740 K7EPK0 472 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 TAAR5O14804 337 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 LILRA1O75019 489 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 SPINK2P20155 84 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 PPP1CCP36873 323 aaKnown RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 KDF1Q8NAX2 398 aaPredicted RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 OR5A2Q8NGI9 324 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 Q8WTZ3 238 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 LURAP1Q96LR2 239 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 RCL1Q9Y2P8 373 aaKnown RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 FABP4P15090 132 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 ERVFRD-1P60508 538 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 FGF12P61328 243 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 P4HA3Q7Z4N8 544 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 EXTL1Q92935 676 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 SYNGR1O43759 233 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 WISP2O76076 250 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 SPCS3P61009 180 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 SP6Q3SY56 376 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 ABCA11PQ4W5N1 156 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 DPPA2Q7Z7J5 298 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 OR5P3Q8WZ94 311 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 NEU1Q99519 415 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 SLC35B3Q9H1N7 401 aa11.94□□□□□ -0.5
MSH5-202ENST00000375740 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
MSH5-202ENST00000375740 MED12LQ86YW9 2145 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 TGIF2-C20orf24A0A0A6YYL0 155 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A8PA6NJQ4 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A22PA8MWA6 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 JTBO76095 146 aa11.93□□□□□ -0.5
MSH5-202ENST00000375740 TRGC2P03986 189 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms