RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPINK2P20155 84 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 MDKP21741 143 aaPredicted RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 DSCR4P56555 118 aaPredicted RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 RAB11AP62491 216 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 PCOLCEQ15113 449 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 DHRS13Q6UX07 377 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 PPP1R2P9O14990 202 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 TK1P04183 234 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 CST2P09228 141 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 BCL3P20749 454 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 IL11RAQ14626 422 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 YRDCQ86U90 279 aaKnown RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 INTS12Q96CB8 462 aaKnown RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 F10P00742 488 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 EDN3P14138 238 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 FABP4P15090 132 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 CD200P41217 278 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 TLE4Q04727 773 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM267Q0VDI3 215 aaPredicted RBP12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 GAMTQ14353 236 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 OR8B8Q15620 311 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 FAM185AQ8N0U4 392 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 CRIM1Q9NZV1 1036 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 NOSIPQ9Y314 301 aaKnown RBP12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 FRYQ5TBA9 3013 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 IGHV3-9P01782 118 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 UNQ6494/PRO21346Q6UXR6 183 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 SLC35E3Q7Z769 313 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 FAM210BQ96KR6 192 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 OPA3Q9H6K4 179 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 RNF115Q9Y4L5 304 aa12.09□□□□□ -0.47
CLCNKA-202ENST00000375692 GVINP1Q7Z2Y8 2422 aa12.08□□□□□ -0.47
CLCNKA-202ENST00000375692 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 VDAC1P21796 283 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 PLA2G5P39877 138 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 TAS2R30P59541 319 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 RAC1P63000 192 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 CEACAM16Q2WEN9 425 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 MRPL14Q6P1L8 145 aaKnown RBP12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 LCN15Q6UWW0 184 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 ATP5SQ99766 215 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 SSX3Q99909 188 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF665Q9H7R5 613 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 Q9N2K0 584 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 SIRT7Q9NRC8 400 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 LOXL2Q9Y4K0 774 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF816-ZNF321PA0A0X1KG74 233 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 AAED1Q7RTV5 226 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 RBMXL1Q96E39 390 aaKnown RBP12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 RPRMQ9NS64 109 aa12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 PTRH2Q9Y3E5 179 aaKnown RBP12.08□□□□□ -0.48
CLCNKA-202ENST00000375692 COL27A1Q8IZC6 1860 aaPredicted RBP12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A0G2JMM0 328 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A1W2PPB8 328 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A1W2PRS3 328 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 KIR3DP1A8MWS1 328 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 PGA5P0DJD9 388 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 UCP1P25874 307 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF880Q6PDB4 577 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 NEK7Q8TDX7 302 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 FOXB1Q99853 325 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 TCFL5Q9UL49 500 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 OR5H1A6NKK0 313 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CXCL13O43927 109 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CEACAM1P13688 526 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CCNOP22674 350 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CARD18P57730 90 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 BAXQ07812 192 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms