RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 COMMD7Q86VX2 200 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 OR2Z1Q8NG97 314 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 CNTNAP3BQ96NU0 1288 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 CNTNAP3Q9BZ76 1288 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 TAAR3PQ9P1P4 343 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 TRAPPC2LQ9UL33 140 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 ZNF835Q9Y2P0 537 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 SPEF1Q9Y4P9 236 aa16.52■□□□□ 0.23
HDAC1-201ENST00000373548 IGHV3-13P01766 116 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 FAM87AP0C7U9 286 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 MRGPRGQ86SM5 289 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
HDAC1-201ENST00000373548 ASF1BQ9NVP2 202 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 OR1A1Q9P1Q5 309 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 OR2W1Q9Y3N9 320 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 hCG_1807616A0A1W2PRN6 198 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 NPIPB11E5RHQ5 1161 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 HSD17B6O14756 317 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 RRASP10301 218 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 IL1F10Q8WWZ1 152 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 AQP10Q96PS8 301 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 GPHA2Q96T91 129 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM222Q9H0R3 208 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 SH3BGRL2Q9UJC5 107 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 WIPI2Q9Y4P8 454 aa16.51■□□□□ 0.23
HDAC1-201ENST00000373548 ZSCAN5BA6NJL1 495 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 ATP6V1G2-DDX39BF2Z307 99 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 F5H0A9 414 aaPredicted RBP16.5■□□□□ 0.23
HDAC1-201ENST00000373548 MZT1Q08AG7 82 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 MEX3BQ6ZN04 569 aaKnown RBP16.5■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM171Q8WVE6 324 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 DMRTA2Q96SC8 542 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 GLS2Q9UI32 602 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 FBXO9Q9UK97 447 aaPredicted RBP16.5■□□□□ 0.23
HDAC1-201ENST00000373548 KIAA2026Q5HYC2 2103 aa16.5■□□□□ 0.23
HDAC1-201ENST00000373548 PTBP3O95758 552 aaKnown RBP16.49■□□□□ 0.23
HDAC1-201ENST00000373548 TFF1P04155 84 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 CD200P41217 278 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 TMPRSS3P57727 454 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 VHLLQ6RSH7 139 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 SLC35G3Q8N808 338 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 DNAJB11Q9UBS4 358 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 KLF3P57682 345 aaPredicted RBP16.49■□□□□ 0.23
HDAC1-201ENST00000373548 HMGN3Q15651 99 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 PRR18Q8N4B5 295 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 PRR7Q8TB68 274 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 LRRC29Q8WV35 223 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 CXorf58Q96LI9 332 aa16.49■□□□□ 0.23
HDAC1-201ENST00000373548 USB1Q9BQ65 265 aaKnown RBP16.49■□□□□ 0.23
HDAC1-201ENST00000373548 ERRFI1Q9UJM3 462 aaPredicted RBP16.49■□□□□ 0.23
HDAC1-201ENST00000373548 NUP62P37198 522 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-201ENST00000373548 SRPXP78539 464 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 SMIM21Q3B7S5 101 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 C1QTNF12Q5T7M4 302 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM268Q5VZI3 342 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 RELL2Q8NC24 303 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-201ENST00000373548 UBALD1Q8TB05 177 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 UBE2J1Q9Y385 318 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-201ENST00000373548 IGLV3-9A0A075B6K5 115 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 DEDDO75618 318 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM56Q96MV1 263 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TAF9BQ9HBM6 251 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 CYTL1Q9NRR1 136 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TMED3Q9Y3Q3 217 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 LSM5Q9Y4Y9 91 aaKnown RBP16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM56-RWDD3S4R434 201 aa16.48■□□□□ 0.23
HDAC1-201ENST00000373548 TMEM30CPA0ZSE6 113 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 SCGB1D2O95969 90 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 MBPP02686 304 aaPredicted RBP16.47■□□□□ 0.23
HDAC1-201ENST00000373548 CD40P25942 277 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 TESK1Q15569 626 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 SPRNQ5BIV9 151 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 FAM74A1Q5RGS3 127 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 CMTM1Q8IZ96 169 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 PHYHIPLQ96FC7 376 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 METRNQ9UJH8 293 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 RAXQ9Y2V3 346 aa16.47■□□□□ 0.23
HDAC1-201ENST00000373548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-201ENST00000373548 PGLYRP1O75594 196 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-201ENST00000373548 EGR1P18146 543 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 SLC35E4Q6ICL7 350 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 BVESQ8NE79 360 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 OR10V1Q8NGI7 309 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 OR52M1Q8NGK5 317 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 STOML3Q8TAV4 291 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 COQ2Q96H96 371 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 SHARPINQ9H0F6 387 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 C16orf97H3BN30 126 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 IFNL4K9M1U5 179 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 TNFSF12O43508 249 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 HKR1P10072 659 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 UCP1P25874 307 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 OR3A1P47881 315 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 AESQ08117 197 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 SMCO1Q147U7 214 aa16.46■□□□□ 0.23
HDAC1-201ENST00000373548 SELENOHQ8IZQ5 122 aaKnown RBP16.46■□□□□ 0.23
HDAC1-201ENST00000373548 LILRB1Q8NHL6 650 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-201ENST00000373548 JKAMPQ9P055 326 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms