RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 PTX4Q96A99 478 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 KLK13Q9UKR3 277 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 C5orf67F2Z3F1 127 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 NDUFB3O43676 98 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 GOSR1O95249 250 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 ZPLD1Q8TCW7 415 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 WDR13Q9H1Z4 485 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 CXXC4Q9H2H0 198 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 KLHDC2Q9Y2U9 406 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 ERGP11308 486 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 CD82P27701 267 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 OR8A1Q8NGG7 326 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 HBZP02008 142 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 TNFRSF1AP19438 455 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 RASL10BQ96S79 203 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 MRPL13Q9BYD1 178 aaKnown RBP12.47□□□□□ -0.41
LMX1B-202ENST00000373474 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 MFSD2BA6NFX1 497 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 SYNGR2O43760 224 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 MOSPD3O75425 235 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 IGKV1D-16P01601 117 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 KIR2DL1P43626 348 aaPredicted RBP12.47□□□□□ -0.41
LMX1B-202ENST00000373474 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 TNFSF18Q9UNG2 199 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 A0A1W2PR80 420 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 SPINT1O43278 529 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 KIR3DL2P43630 455 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 GNG10P50151 68 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 TCL1AP56279 114 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 ADTRPQ96IZ2 230 aa12.47□□□□□ -0.41
LMX1B-202ENST00000373474 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
LMX1B-202ENST00000373474 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 NANOS3P60323 173 aaKnown RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 NAAAQ02083 359 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 ZNF273Q14593 569 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 ADIPOQQ15848 244 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 MS4A7Q9GZW8 240 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 FZR1Q9UM11 496 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 DSPPQ9NZW4 1301 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 SRSF10O75494 262 aaKnown RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 CLDN18P56856 261 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 EIF3IQ13347 325 aaKnown RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 PRSS53Q2L4Q9 553 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 ZNF880Q6PDB4 577 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 ZNF721Q8TF20 911 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 GMPPAQ96IJ6 420 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 WFIKKN1Q96NZ8 548 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 OR2V2Q96R30 315 aa12.46□□□□□ -0.41
LMX1B-202ENST00000373474 ALX4Q9H161 411 aaPredicted RBP12.46□□□□□ -0.41
LMX1B-202ENST00000373474 COMPP49747 757 aaPredicted RBP12.46□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM255AQ5JRV8 349 aa12.46□□□□□ -0.42
LMX1B-202ENST00000373474 MRPL54Q6P161 138 aaKnown RBP12.46□□□□□ -0.42
LMX1B-202ENST00000373474 C9orf40Q8IXQ3 194 aa12.46□□□□□ -0.42
LMX1B-202ENST00000373474 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.42
LMX1B-202ENST00000373474 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.42
LMX1B-202ENST00000373474 M0R296 226 aa12.46□□□□□ -0.42
LMX1B-202ENST00000373474 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.42
LMX1B-202ENST00000373474 THYN1Q9P016 225 aa12.46□□□□□ -0.42
LMX1B-202ENST00000373474 OR4C46A6NHA9 309 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 CXorf1O96002 111 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 HIST1H1BP16401 226 aaKnown RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 COL8A1P27658 744 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 GPR27Q9NS67 375 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 C16orf82Q7Z2V1 217 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 PMCHL2Q9BQD1 86 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 LMX1BO60663 402 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 TM4SF19Q96DZ7 209 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 IGKV1-8A0A0C4DH67 115 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 ASAH2BP0C7U1 165 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 CD40P25942 277 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 HINT1P49773 126 aaPredicted RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 GNB2P62879 340 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM211Q6ICI0 200 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 MRPS18BQ9Y676 258 aaKnown RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
LMX1B-202ENST00000373474 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 FUT5Q11128 374 aa12.45□□□□□ -0.42
LMX1B-202ENST00000373474 ZP4Q12836 540 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms