RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 HSBP1O75506 76 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 SPNP16150 400 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 COL10A1Q03692 680 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 CTF1Q16619 201 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 ANKRD55Q3KP44 614 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR10AC1Q8NH08 325 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TMEM37Q8WXS4 190 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 ANGPTL4Q9BY76 406 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 CENPVL1A0A0U1RR11 272 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TMEM210A6NLX4 147 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 SFT2D2O95562 160 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 UBE2L3P68036 154 aaKnown RBP8.56□□□□□ -1.04
COL4A6-202ENST00000372216 SSX1Q16384 188 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 PRSS8Q16651 343 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR8I2Q8N0Y5 310 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR8G5Q8NG78 346 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 PTX4Q96A99 478 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 UQCC1Q9NVA1 299 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 IGHV3-66A0A0C4DH42 116 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 A0A0J9YW62 118 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 FAM24AA6NFZ4 105 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF324O75467 553 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-202ENST00000372216 IGHA1P01876 353 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 FGF9P31371 208 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-202ENST00000372216 NUBP1P53384 320 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TM4SF20Q53R12 229 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 C10orf35Q96D05 121 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 R3HDM4Q96D70 268 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 C16orf92Q96LL3 132 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 METTL26Q96S19 204 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 FOXC2Q99958 501 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR2J1Q9GZK6 312 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 PMELP40967 661 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 OR4P4Q8NGL7 312 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF488Q96MN9 340 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 TRPM6Q9BX84 2022 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 LANCL1O43813 399 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 CSRP2Q16527 193 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 GLDNQ6ZMI3 551 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-202ENST00000372216 STARD4Q96DR4 205 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 CCL13Q99616 98 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 YAE1D1Q9NRH1 226 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 A0A1W2PQM1 296 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 SMPD2O60906 423 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF737O75373 536 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 UPK3AO75631 287 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 COX6A1P12074 109 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF770Q6IQ21 691 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-202ENST00000372216 EBLN2Q6P2I7 272 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF429Q86V71 674 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 GPX7Q96SL4 187 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-202ENST00000372216 CA10Q9NS85 328 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 STARD10Q9Y365 291 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 PRR19A6NJB7 356 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 M0R3E3 92 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 FAM87AP0C7U9 286 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 ERGP11308 486 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 PJVKQ0ZLH3 352 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 LOC101059948A0A1B0GTJ6 334 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 OR5AC1P0C628 307 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 KIR2DL2P43627 348 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-202ENST00000372216 PACRGQ96M98 296 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-202ENST00000372216 HEXA-AS1Q9H8Q6 139 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 TMED3Q9Y3Q3 217 aa8.55□□□□□ -1.04
COL4A6-202ENST00000372216 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 AHRRA9YTQ3 701 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 CYB5R3P00387 301 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-202ENST00000372216 DYNLT3P51808 116 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 DOLPP1Q86YN1 238 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 Q8WTZ3 238 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 AURKAIP1Q9NWT8 199 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-202ENST00000372216 LNP1A1A4G5 178 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 BCL2L11O43521 198 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 TSPAN2O60636 221 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 PSG5Q15238 335 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 MIDNQ504T8 468 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 CDCP2Q5VXM1 449 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 OR4X1Q8NH49 305 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 OR4S2Q8NH73 311 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 NEURL2Q9BR09 285 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SELENOKQ9Y6D0 94 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 TTRP02766 147 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 DMKNQ6E0U4 476 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-202ENST00000372216 XAF1Q6GPH4 301 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 FAM214BQ7L5A3 538 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 SPICQ8N5J4 248 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 ADTRPQ96IZ2 230 aa8.54□□□□□ -1.04
COL4A6-202ENST00000372216 HARBI1Q96MB7 349 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms