RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 ATP6V0CP27449 155 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 TEPPQ6URK8 271 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 MPTX1A8MV57 137 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 RBM11P57052 281 aaKnown RBP13.53□□□□□ -0.24
COL5A1-201ENST00000371817 PRSS8Q16651 343 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 OR10D3Q8NH80 312 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 B3GALT4O96024 378 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-201ENST00000371817 CXCL2P19875 107 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 RIPPLY3P57055 190 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 OTPQ5XKR4 325 aa13.53□□□□□ -0.24
COL5A1-201ENST00000371817 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-201ENST00000371817 LOC105371267A0A1B0GV96 52 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 SIGLEC7Q9Y286 467 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 TRIOBPQ9H2D6 2365 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 PRNTQ86SH4 94 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 NPEPL1Q8NDH3 523 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 ATP23Q9Y6H3 246 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 GAPDHP04406 335 aaKnown RBP13.52□□□□□ -0.24
COL5A1-201ENST00000371817 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 ADAD2Q8NCV1 583 aaKnown RBP13.52□□□□□ -0.24
COL5A1-201ENST00000371817 AUP1Q9Y679 476 aa13.52□□□□□ -0.24
COL5A1-201ENST00000371817 HOXA4Q00056 320 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-201ENST00000371817 RHBDD1Q8TEB9 315 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 FGF14Q92915 247 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 TINAGQ9UJW2 476 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 MEF2CQ06413 473 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF275Q9NSD4 429 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-201ENST00000371817 A0A087WUJ7 227 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 TMEM262E9PQX1 116 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 EDN1P05305 212 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 AGAP20933 346 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 OR5A1Q8NGJ0 315 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 RASL11BQ9BPW5 248 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 SIRT5Q9NXA8 310 aa13.52□□□□□ -0.25
COL5A1-201ENST00000371817 DEFB108AA8MXU0 73 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 GLIPR1P48060 266 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 ACVR1Q04771 509 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 TLNRD1Q9H1K6 362 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 HOXD4P09016 255 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF735P0CB33 412 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 RPS4XP62701 263 aaKnown RBP13.51□□□□□ -0.25
COL5A1-201ENST00000371817 WNT5BQ9H1J7 359 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 MEGF9Q9H1U4 602 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 PPICP45877 212 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 TMEM95Q3KNT9 176 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 SLC36A1Q7Z2H8 476 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 C16orf52Q8NHV5 167 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 MAP1LC3AQ9H492 121 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 IGHV3-15A0A0B4J1V0 119 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 HDHD3Q9BSH5 251 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-201ENST00000371817 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 HCFC1R1Q9NWW0 138 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 UPK1AO00322 258 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 NTHL1P78549 312 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 P2RX4Q99571 388 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 TMEM202A6NGA9 273 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 NRG2O14511 850 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-201ENST00000371817 PRR13Q9NZ81 148 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 DEGS2Q6QHC5 323 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 C17orf47Q8NEP4 570 aa13.51□□□□□ -0.25
COL5A1-201ENST00000371817 KLK8O60259 260 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 ZNF770Q6IQ21 691 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-201ENST00000371817 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 GPR27Q9NS67 375 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 KIRREL2Q6UWL6 708 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 FAM219AQ8IW50 185 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 OR5AC2Q9NZP5 309 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 ONECUT1Q9UBC0 465 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 M0R1B8 84 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 PLA2G10O15496 165 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 CCL5P13501 91 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 KLK2P20151 261 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 CA10Q9NS85 328 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 IGHV4-34P06331 123 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 GPR3P46089 330 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 SPATA46Q5T0L3 261 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 CD300LDQ6UXZ3 194 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 C7orf71A4D174 169 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 NDUFB4O95168 129 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 MICBQ29980 383 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 VSTM2AQ8TAG5 236 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 RICTORQ6R327 1708 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 H0YIG0 161 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 GNG7O60262 68 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 ELOVL5Q9NYP7 299 aa13.5□□□□□ -0.25
COL5A1-201ENST00000371817 TRAV8-2A0A0B4J237 113 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 A0A1W2PR80 420 aa13.49□□□□□ -0.25
COL5A1-201ENST00000371817 MYOGP15173 224 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms