RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 GOLT1BQ9Y3E0 138 aa8.31□□□□□ -1.08
LRRC40-201ENST00000370952 RNF115Q9Y4L5 304 aa8.31□□□□□ -1.08
LRRC40-201ENST00000370952 PIAS3Q9Y6X2 628 aa8.31□□□□□ -1.08
LRRC40-201ENST00000370952 MAP1LC3B2A6NCE7 125 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 B4E171 279 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 HSPB6O14558 160 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 SCTP09683 121 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 VDAC1P21796 283 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 TSPAN7P41732 249 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 RPL23P62829 140 aaKnown RBP8.3□□□□□ -1.08
LRRC40-201ENST00000370952 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 EIF3IQ13347 325 aaKnown RBP8.3□□□□□ -1.08
LRRC40-201ENST00000370952 DEFB133Q30KQ1 61 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 MYPOPQ86VE0 399 aaPredicted RBP8.3□□□□□ -1.08
LRRC40-201ENST00000370952 OR10G3Q8NGC4 313 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 SCGB1C1Q8TD33 95 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF385AQ96PM9 386 aaKnown RBP8.3□□□□□ -1.08
LRRC40-201ENST00000370952 PYGO2Q9BRQ0 406 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 MAP1LC3BQ9GZQ8 125 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 PDCD6O75340 191 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF737O75373 536 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 PATE4P0C8F1 98 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 NPBWR2P48146 333 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 SHBQ15464 509 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 TMEM240Q5SV17 173 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 SPSB1Q96BD6 273 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 MRGPRX4Q96LA9 322 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 METTL7AQ9H8H3 244 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 SEMA5BQ9P283 1151 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 MYOTQ9UBF9 498 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 LINC01565O15544 149 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 DLEU1O43261 78 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 TLX3O43711 291 aaPredicted RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 LCATP04180 440 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 CA3P07451 260 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF705DP0CH99 300 aaPredicted RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF705BP0CI00 300 aaPredicted RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 RAB4AP20338 218 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 MDH2P40926 338 aaKnown RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 FASLGP48023 281 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 SUMO3P55854 103 aaPredicted RBP8.29□□□□□ -1.08
LRRC40-201ENST00000370952 CALHM1Q8IU99 346 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 GATAD1Q8WUU5 269 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 NABP1Q96AH0 204 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 TRBV11-1A0A0K0K1C0 115 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 NUPR1O60356 82 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 CST2P09228 141 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 TCN2P20062 427 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 PCP4P48539 62 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 MRGPRGQ86SM5 289 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 TMEM256Q8N2U0 113 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 OR51H1Q8NH63 302 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 RLN3Q8WXF3 142 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 LHX4Q969G2 390 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 R3HDM4Q96D70 268 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
LRRC40-201ENST00000370952 SLC22A20A6NK97 555 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 C5orf67F2Z3F1 127 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 UCP1P25874 307 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 OTX1P32242 354 aaPredicted RBP8.28□□□□□ -1.08
LRRC40-201ENST00000370952 PDLIM4P50479 330 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 BLKP51451 505 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
LRRC40-201ENST00000370952 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
LRRC40-201ENST00000370952 BATFQ16520 125 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 PRAMEF20Q5VT98 475 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 CYP2G1PQ6ZSU1 146 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 GPR146Q96CH1 333 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 SDSLQ96GA7 329 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 P2RX4Q99571 388 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 AURKAIP1Q9NWT8 199 aaPredicted RBP8.28□□□□□ -1.08
LRRC40-201ENST00000370952 ZNHIT1O43257 154 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 NRASP01111 189 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 HRASP01112 189 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 MYF5P13349 255 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 IRF2P14316 349 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 PTGDSP41222 190 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 OR3A1P47881 315 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 OR1D5P58170 312 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 DAZAP2Q15038 168 aaPredicted RBP8.28□□□□□ -1.08
LRRC40-201ENST00000370952 SHHQ15465 462 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 C1orf194Q5T5A4 169 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 CST9LP1Q5W188 147 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 ZNF774Q6NX45 483 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 Q6ZRM9 215 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 WDR5BQ86VZ2 330 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 TGIF2LYQ8IUE0 185 aa8.28□□□□□ -1.08
LRRC40-201ENST00000370952 OR1K1Q8NGR3 316 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms