RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CTSBP07858 339 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 EWSR1Q01844 656 aaKnown RBP eCLIP17.11■□□□□ 0.33
LMO4-202ENST00000370544 HARBI1Q96MB7 349 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 ABHD14AQ9BUJ0 271 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 C1RLQ9NZP8 487 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 INSIG2Q9Y5U4 225 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 SULT1A1P50225 295 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 C9orf62Q8N4C0 152 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 CLEC5AQ9NY25 188 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 LIPGQ9Y5X9 500 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 HS3ST3B1Q9Y662 390 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
LMO4-202ENST00000370544 PTPRZ1P23471 2315 aaPredicted RBP17.11■□□□□ 0.33
LMO4-202ENST00000370544 A0A1B0GU03 582 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 TMEM50BP56557 158 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 SLC25A10Q9UBX3 287 aaPredicted RBP17.11■□□□□ 0.33
LMO4-202ENST00000370544 SYNGR1O43759 233 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 FHL5Q5TD97 284 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 C12orf57Q99622 126 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 FCGR3AP08637 254 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 SFTPCP11686 197 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 UCP2P55851 309 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 RNASEKQ6P5S7 137 aaKnown RBP17.11■□□□□ 0.33
LMO4-202ENST00000370544 SLC25A47Q6Q0C1 308 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 PGLYRP3Q96LB9 341 aa17.11■□□□□ 0.33
LMO4-202ENST00000370544 SCN3AQ9NY46 2000 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 A0A1W2PNV4 684 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 SP9P0CG40 484 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 KRTCAP3Q53RY4 240 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 FAM24BQ8N5W8 94 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 CLN8Q9UBY8 286 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 KCNE5Q9UJ90 142 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 DSPPQ9NZW4 1301 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 PPIAL4EA0A075B759 164 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 PPIAL4DF5H284 164 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 GNG7O60262 68 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 PPIAL4FP0DN26 164 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 PRDX2P32119 198 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 PPIAL4AQ9Y536 164 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 HSD17B13Q7Z5P4 300 aaPredicted RBP17.1■□□□□ 0.33
LMO4-202ENST00000370544 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
LMO4-202ENST00000370544 TOLLIPQ9H0E2 274 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 NAGKQ9UJ70 344 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 TRBV5-5A0A0J9YX44 114 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 HOXD4P09016 255 aaPredicted RBP17.1■□□□□ 0.33
LMO4-202ENST00000370544 GAMTQ14353 236 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 KLHDC1Q8N7A1 406 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 AMELYQ99218 206 aa17.1■□□□□ 0.33
LMO4-202ENST00000370544 RD3LP0DJH9 198 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 COX6A1P12074 109 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 FABP4P15090 132 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 PPP1CCP36873 323 aaKnown RBP17.09■□□□□ 0.33
LMO4-202ENST00000370544 HIST1H3AP68431 136 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 P2RY6Q15077 328 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 OR4D10Q8NGI6 311 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 SSMEM1Q8WWF3 244 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 NAT8Q9UHE5 227 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 KIAA1324LA8MWY0 1029 aaPredicted RBP17.09■□□□□ 0.33
LMO4-202ENST00000370544 CDRT15L2A8MXV6 281 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 Q9N2K0 584 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 IGLV1-36A0A0B4J1U3 117 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 FCN1O00602 326 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 CSRP3P50461 194 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 FAM78BQ5VT40 261 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 FAM210BQ96KR6 192 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 GDF15Q99988 308 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 A0A1W2PQM1 296 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 PRR33A8MZF0 331 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
LMO4-202ENST00000370544 ROM1Q03395 351 aa17.08■□□□□ 0.33
LMO4-202ENST00000370544 PSG5Q15238 335 aa17.08■□□□□ 0.33
LMO4-202ENST00000370544 OR4P4Q8NGL7 312 aa17.08■□□□□ 0.33
LMO4-202ENST00000370544 C11orf94C9JXX5 98 aa17.08■□□□□ 0.32
LMO4-202ENST00000370544 ACP1P24666 158 aa17.08■□□□□ 0.32
LMO4-202ENST00000370544 AHRRA9YTQ3 701 aa17.08■□□□□ 0.32
LMO4-202ENST00000370544 IGF2P01344 180 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 RANP62826 216 aaKnown RBP17.07■□□□□ 0.32
LMO4-202ENST00000370544 TEX30Q5JUR7 227 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 C11orf42Q8N5U0 333 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 PRSS50Q9UI38 385 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 DUXBA0A1W2PPF3 345 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 CTHRC1Q96CG8 243 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 A0A1W2PPE3 182 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 A0A1W2PR77 199 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 PHOX2AO14813 284 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 HTR1DP28221 377 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 FGF12P61328 243 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 RPL31P62899 125 aaKnown RBP17.07■□□□□ 0.32
LMO4-202ENST00000370544 FAM219AQ8IW50 185 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 ASCL3Q9NQ33 180 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 SPAG17Q6Q759 2223 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 F5H697 171 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 CCL8P80075 99 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 SCMH1Q96GD3 660 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 NUDT16L1Q9BRJ7 211 aaKnown RBP17.07■□□□□ 0.32
LMO4-202ENST00000370544 TMEM74BQ9NUR3 256 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 PTTG1IPP53801 180 aa17.07■□□□□ 0.32
LMO4-202ENST00000370544 PNRC1Q12796 327 aaPredicted RBP17.07■□□□□ 0.32
LMO4-202ENST00000370544 LGALSLQ3ZCW2 172 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms