RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
NCSTN-202ENST00000368063 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 ELOVL5Q9NYP7 299 aa11.31□□□□□ -0.6
NCSTN-202ENST00000368063 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 IGKV1D-43A0A0B4J1Z2 117 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 SH2D1BO14796 132 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 CLDN18P56856 261 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 ZP4Q12836 540 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 TCEAL8Q8IYN2 117 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 HEBP2Q9Y5Z4 205 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 F2Z2F3 143 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 GDF9O60383 454 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 DXOO77932 396 aaKnown RBP11.3□□□□□ -0.6
NCSTN-202ENST00000368063 RRADP55042 308 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 KRTDAPP60985 99 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 FOXL1Q12952 345 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
NCSTN-202ENST00000368063 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 VDAC3Q9Y277 283 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 BRCA2P51587 3418 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 RNF212BA8MTL3 300 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 SLC33A1O00400 549 aaPredicted RBP11.3□□□□□ -0.6
NCSTN-202ENST00000368063 ADAM20O43506 726 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 CHST1O43916 411 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 WISP1O95388 367 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 IL33O95760 270 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 ARR3P36575 388 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 LY6G5CQ5SRR4 150 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 DEFB118Q96PH6 123 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 ZDHHC11Q9H8X9 412 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
NCSTN-202ENST00000368063 C3orf85A0A1B0GTC6 90 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 FAM166BA8MTA8 275 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ACRP10323 421 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 CD99P14209 185 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 SRPXP78539 464 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ABHD12BQ7Z5M8 362 aaPredicted RBP11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 TGFBR3LH3BV60 316 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 K7ERU9 68 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 CRISP2P16562 243 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 OPRM1P35372 400 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 VEGFBP49765 207 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 CCR5P51681 352 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 HYAL1Q12794 435 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 KISS1Q15726 138 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.68e-8■■■□□ 15.4
NCSTN-202ENST00000368063 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 PLEKHJ1Q9NW61 149 aa11.29□□□□□ -0.6
NCSTN-202ENST00000368063 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
NCSTN-202ENST00000368063 AQP7P3A6NL99 342 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 MT-ATP6P00846 226 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 CAPZBP47756 277 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
NCSTN-202ENST00000368063 FLVCR1-AS1Q8TAF5 88 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 OR6C1Q96RD1 312 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 NXPH3O95157 252 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 GPX1P07203 203 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 CCL5P13501 91 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 SEC13P55735 322 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 PRR27Q6MZM9 219 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 OR8B12Q8NGG6 310 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 C16orf52Q8NHV5 167 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 FAM3CQ92520 227 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 LHX4Q969G2 390 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
NCSTN-202ENST00000368063 TIMM29Q9BSF4 260 aa11.28□□□□□ -0.6
NCSTN-202ENST00000368063 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.6
NCSTN-202ENST00000368063 PLPP3O14495 311 aa11.27□□□□□ -0.6
NCSTN-202ENST00000368063 MPPED1O15442 326 aa11.27□□□□□ -0.6
NCSTN-202ENST00000368063 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.6
NCSTN-202ENST00000368063 POU2F2P09086 479 aa11.27□□□□□ -0.6
NCSTN-202ENST00000368063 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.6
NCSTN-202ENST00000368063 ARF6P62330 175 aa11.27□□□□□ -0.6
NCSTN-202ENST00000368063 SERF2P84101 59 aa11.27□□□□□ -0.6
NCSTN-202ENST00000368063 PLPPR5Q32ZL2 321 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms