RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 NPY1RP25929 384 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 FAM27D1Q5T7N8 215 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 SPANXN1Q5VSR9 72 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 DNASE2BQ8WZ79 361 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 YAE1D1Q9NRH1 226 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 MOB4Q9Y3A3 225 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ICE1Q9Y2F5 2266 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF737O75373 536 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 PMCHP20382 165 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ACAA2P42765 397 aaKnown RBP9.58□□□□□ -0.88
CLIP1-203ENST00000361654 C9orf40Q8IXQ3 194 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 NDUFB6O95139 128 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 ADRB1P08588 477 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 TSPOP30536 169 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 COMPP49747 757 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-203ENST00000361654 FAM78BQ5VT40 261 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 OR10C1Q96KK4 312 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 PYCARD-AS1I3L0S3 204 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 SYNGR3O43761 229 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 MELTFP08582 738 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 FGF9P31371 208 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-203ENST00000361654 WNT3P56703 355 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF680Q8NEM1 530 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 C10orf90Q96M02 699 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 MANBALQ9NQG1 85 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 CTAG2O75638 210 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 TGIF1Q15583 401 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 ITLN1Q8WWA0 313 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 ADIPOR1Q96A54 375 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 EVPLQ92817 2033 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 A0A0J9YW62 118 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 GEMIN2O14893 280 aaKnown RBP9.57□□□□□ -0.88
CLIP1-203ENST00000361654 OR2A4O95047 310 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 NGFRP08138 427 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 AESQ08117 197 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 PSG5Q15238 335 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 FAM181AQ8N9Y4 354 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF721Q8TF20 911 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 OR2A7Q96R45 310 aa9.57□□□□□ -0.88
CLIP1-203ENST00000361654 PPIAL4CA0A0B4J2A2 164 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 BMPR1BO00238 502 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 PPIAL4GP0DN37 164 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 REG1BP48304 166 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 KHDC3LQ587J8 217 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 MESTQ5EB52 335 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 FAM27BQ5VT28 67 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 DHRS11Q6UWP2 260 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 ASCC3Q8N3C0 2202 aaKnown RBP9.56□□□□□ -0.88
CLIP1-203ENST00000361654 ZG16BQ96DA0 208 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 HYPMO75409 117 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF735P0CB33 412 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 KIAA0040Q15053 153 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 AANATQ16613 207 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 GLDNQ6ZMI3 551 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-203ENST00000361654 DUX5Q96PT3 197 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 SCNM1Q9BWG6 230 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 TMEM56-RWDD3S4R434 201 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 PSMB2P49721 201 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 NUTF2P61970 127 aaKnown RBP9.56□□□□□ -0.88
CLIP1-203ENST00000361654 C1QL3Q5VWW1 255 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 SCGB1D4Q6XE38 83 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 RPS4Y2Q8TD47 263 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 METTL1Q9UBP6 276 aaKnown RBP9.56□□□□□ -0.88
CLIP1-203ENST00000361654 hCG_38984A0A1B0GV85 526 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 FOXS1O43638 330 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 FABP4P15090 132 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 CAMPP49913 170 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 HNRNPA3P51991 378 aaKnown RBP9.56□□□□□ -0.88
CLIP1-203ENST00000361654 PRSS12P56730 875 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 SNX22Q96L94 193 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 TTC3P53804 2025 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 RPL36A-HNRNPH2H7BZ11 118 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 S1PR2O95136 353 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 BGLAPP02818 100 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 LIPFP07098 398 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 VAMP3Q15836 100 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 LY6EQ16553 131 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 PLPPR5Q32ZL2 321 aa9.56□□□□□ -0.88
CLIP1-203ENST00000361654 MFNGO00587 321 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 FCN1O00602 326 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 HPRT1P00492 218 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 MBPP02686 304 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 RPS4XP62701 263 aaKnown RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 IFITM3Q01628 133 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF154Q13106 437 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 KLF9Q13886 244 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-203ENST00000361654 GUK1Q16774 197 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 BHLHA9Q7RTU4 235 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 OR52B4Q8NGK2 314 aa9.55□□□□□ -0.88
CLIP1-203ENST00000361654 TIMP4Q99727 224 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms