RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 DTD1Q8TEA8 209 aa4.87□□□□□ -1.63
PTPRD-202ENST00000356435 GPX7Q96SL4 187 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-202ENST00000356435 TREM2Q9NZC2 230 aa4.87□□□□□ -1.63
PTPRD-202ENST00000356435 SIGLEC7Q9Y286 467 aa4.87□□□□□ -1.63
PTPRD-202ENST00000356435 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.87□□□□□ -1.63
PTPRD-202ENST00000356435 KLF7O75840 302 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 GCGP01275 180 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CTSDP07339 412 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ADRA2AP08913 450 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 TSPOP30536 169 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PDCD1Q15116 288 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 GLRX5Q86SX6 157 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ZBTB44Q8NCP5 570 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 OR52B4Q8NGK2 314 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 OR1L8Q8NGR8 309 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 TMEM191AQ9H0A3 160 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 MMP26Q9NRE1 261 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 KLF2Q9Y5W3 355 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 SMAD7O15105 426 aaKnown RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 DDB2Q92466 427 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PQLC2LA1A4F0 135 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CHST1O43916 411 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 NDUFB6O95139 128 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 IGHV3-13P01766 116 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 IGHV3-7P01780 117 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 METAP1P53582 386 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 LINC00303Q3SY05 128 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CXorf66Q5JRM2 361 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ANAPC16Q96DE5 110 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ELOVL1Q9BW60 279 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ZMIZ1Q9ULJ6 1067 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 STRCP1A6NGW2 1772 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 A0A1B0GU03 582 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 M0R143 59 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CELA2BP08218 269 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 MELTFP08582 738 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 COL8A1P27658 744 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ACAA2P42765 397 aaKnown RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PGFP49763 221 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 GFRA1P56159 465 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CD226Q15762 336 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ETFDHQ16134 617 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 SPANXN1Q5VSR9 72 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PMS2CLQ68D20 193 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 BHLHA9Q7RTU4 235 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 SMRP1Q8NCR6 262 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 WDR34Q96EX3 536 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 WSB1Q9Y6I7 421 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 A0A0B4J293 547 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 C11orf94C9JXX5 98 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CDIPTO14735 213 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 NQO2P16083 231 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 HLA-DRB3P79483 266 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 LGALSLQ3ZCW2 172 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 TMEM78Q5T7P6 136 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 WDR25Q64LD2 544 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 GCSAMQ8N6F7 178 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 OR8B12Q8NGG6 310 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 MAP1LC3CQ9BXW4 147 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 RNF167Q9H6Y7 350 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 RNF122Q9H9V4 155 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PITPNC1Q9UKF7 332 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 WIPI2Q9Y4P8 454 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 TRIP11Q15643 1979 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 IGKV3-7A0A075B6H7 116 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 A8MXK9 166 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CTAG2O75638 210 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ZNF250P15622 560 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 MYOZ3Q8TDC0 251 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ORAI1Q96D31 301 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 EID2BQ96D98 161 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CHRNA10Q9GZZ6 450 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 EVPLQ92817 2033 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 MEX3AA1L020 520 aaKnown RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 A6NDN8 102 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ISLRO14498 428 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 S1PR2O95136 353 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 OR5AC1P0C628 307 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CCL4P13236 92 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CTGFP29279 349 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 P2RY1P47900 373 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CAMPP49913 170 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PSG5Q15238 335 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ADIPOQQ15848 244 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CLEC12BQ2HXU8 276 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 SP6Q3SY56 376 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 RNFT1Q5M7Z0 435 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 ZNF738Q8NE65 137 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 RAB37Q96AX2 223 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 VSTM2LQ96N03 204 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 CTDSPLO15194 276 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 PDE6DO43924 150 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 WNT1P04628 370 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 FABP4P15090 132 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 RPL31P62899 125 aaKnown RBP4.86□□□□□ -1.63
PTPRD-202ENST00000356435 GUK1Q16774 197 aa4.86□□□□□ -1.63
PTPRD-202ENST00000356435 LRRC75BQ2VPJ9 315 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms