RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RNF133Q8WVZ7 376 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 STARD4Q96DR4 205 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ZNF714Q96N38 554 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 OR2V2Q96R30 315 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 RAB33BQ9H082 229 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 WBP1LQ9NX94 342 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 YBX2Q9Y2T7 364 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 LIPGQ9Y5X9 500 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 CACNA1SQ13698 1873 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 DDX60LQ5H9U9 1706 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 DOCK2Q92608 1830 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 K7N7A8 449 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 TTRP02766 147 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ACAA1P09110 424 aaPredicted RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 ZFP36L2P47974 494 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 COMPP49747 757 aaPredicted RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 LOXL3P58215 753 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MMDQ15546 238 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ECSCRQ19T08 205 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 GAB4Q2WGN9 574 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 TMEM255AQ5JRV8 349 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 HYPMO75409 117 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 GAPDHP04406 335 aaKnown RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 CD1AP06126 327 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CSN3P07498 182 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 COX6CP09669 75 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ZNF735P0CB33 412 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CD99P14209 185 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CD1BP29016 333 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 HOXA6P31267 233 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 DRD3P35462 400 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 G6PCP35575 357 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ROM1Q03395 351 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMEM30BQ3MIR4 351 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 FOXB2Q5VYV0 432 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ALG14Q96F25 216 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ABHD1Q96SE0 405 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 SCNM1Q9BWG6 230 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TINAGQ9UJW2 476 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 WIPI2Q9Y4P8 454 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CITO14578 2027 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 IGHV5-10-1A0A0J9YXX1 117 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMEM218A2RU14 115 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CCL21O00585 134 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 MPDU1O75352 247 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 MPZL1O95297 269 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 PRF1P14222 555 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 SELENOPP49908 381 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ZP4Q12836 540 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 AWAT1Q58HT5 328 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 WDFY1Q8IWB7 410 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 FAM222BQ8WU58 562 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 RAB37Q96AX2 223 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 LRRC3BQ96PB8 259 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 METTL26Q96S19 204 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 PAXXQ9BUH6 204 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CCL28Q9NRJ3 127 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TCRBV16S1A1N1A0A5B0 115 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 DHRS7CA6NNS2 312 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 J3QR06 171 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 FFAR1O14842 300 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 NDUFA2O43678 99 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 AGFG2O95081 481 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 SEC11BP0C7V7 166 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 IGFBP6P24592 240 aaPredicted RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 RPS20P60866 119 aaKnown RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 COTL1Q14019 142 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ZNF345Q14585 488 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 DCAF10Q5QP82 559 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMEM78Q5T7P6 136 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CBLN3Q6UW01 205 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 THSD4Q6ZMP0 1018 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 LIMS2Q7Z4I7 341 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 GVQW1Q8N7I0 195 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 AMER3Q8N944 861 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 FRRS1LQ9P0K9 344 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 A0A1W2PRD5 423 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 A0A1W2PRF3 423 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 A0A1W2PRM7 423 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 C5orf67F2Z3F1 127 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 CFDP00746 253 aaPredicted RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 NGFRP08138 427 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMEM50BP56557 158 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 DLK1P80370 383 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 PSG9Q00887 426 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 P2RY6Q15077 328 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ADIPOQQ15848 244 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 LAMTOR1Q6IAA8 161 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 OR1N2Q8NGR9 330 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 COL25A1Q9BXS0 654 aaPredicted RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 IL19Q9UHD0 177 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TRAV34A0A0B4J273 112 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMEM189A5PLL7 270 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 PATE4P0C8F1 98 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TMPRSS3P57727 454 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 SELENOTP62341 195 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms