RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 DCUN1D5Q9BTE7 237 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 LINC00574Q9H8X3 128 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 MBNL3Q9NUK0 354 aaKnown RBP12.76□□□□□ -0.37
TRIM13-201ENST00000356017 ADAM30Q9UKF2 790 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 TRAV18A0A075B6X5 111 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 FAM25AB3EWG3 89 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 FAM25CB3EWG5 89 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 FAM25GB3EWG6 89 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 CLPXO76031 633 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 EIF4EP06730 217 aaKnown RBP12.75□□□□□ -0.37
TRIM13-201ENST00000356017 IGHV1-8P0DP01 117 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 MNDAP41218 407 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 TMEM69Q5SWH9 247 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 HACD4Q5VWC8 232 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 OR52W1Q6IF63 320 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 C1orf229Q6ZS94 237 aaPredicted RBP12.75□□□□□ -0.37
TRIM13-201ENST00000356017 OR10A7Q8NGE5 316 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 MCFD2Q8NI22 146 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 BEX2Q9BXY8 128 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 HEXA-AS1Q9H8Q6 139 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 CALYQ9NYX4 217 aa12.75□□□□□ -0.37
TRIM13-201ENST00000356017 SPINT2O43291 252 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 ELK1P19419 428 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 TALDO1P37837 337 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 BPIFB3P59826 476 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 C17orf58Q2M2W7 97 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 GPR157Q5UAW9 335 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 OLFML2AQ68BL7 652 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 RTN4RL2Q86UN3 420 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 C6orf62Q9GZU0 229 aaPredicted RBP12.74□□□□□ -0.37
TRIM13-201ENST00000356017 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
TRIM13-201ENST00000356017 MMP27Q9H306 513 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 SIRT7Q9NRC8 400 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 A3GALT2U3KPV4 340 aa12.74□□□□□ -0.37
TRIM13-201ENST00000356017 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 NPIPB11E5RHQ5 1161 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 CTDSP2O14595 271 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 MELTFP08582 738 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
TRIM13-201ENST00000356017 SRP14P37108 136 aaKnown RBP12.73□□□□□ -0.37
TRIM13-201ENST00000356017 GNG2P59768 71 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 SCGB2A2Q13296 93 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 CNPY1Q3B7I2 92 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 ZNF880Q6PDB4 577 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 OR13D1Q8NGV5 346 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 ARL11Q969Q4 196 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 SESN1Q9Y6P5 492 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 TMEM235A6NFC5 223 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 TPPPO94811 219 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 DTYMKP23919 212 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 SSTR5P35346 364 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 CHRFAM7AQ494W8 412 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 SETD6Q8TBK2 473 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 LHX4Q969G2 390 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 CYYR1Q96J86 154 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
TRIM13-201ENST00000356017 AUNIPQ9H7T9 357 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 TAF9BQ9HBM6 251 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 Q9N2K0 584 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 IDI2-AS1Q9NZ38 188 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
TRIM13-201ENST00000356017 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 C12orf77C9JDV5 145 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 FSHBP01225 129 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 OMGP23515 440 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 FPR2P25090 351 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 UBE2E1P51965 193 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 TAS2R20P59543 309 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRIM13-201ENST00000356017 PRAMEF5Q5TYX0 476 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 ZNF782Q6ZMW2 699 aaPredicted RBP12.72□□□□□ -0.37
TRIM13-201ENST00000356017 RFESDQ8TAC1 157 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 GALMQ96C23 342 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 KIRREL1Q96J84 757 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 WNK2Q9Y3S1 2297 aa12.72□□□□□ -0.37
TRIM13-201ENST00000356017 HBZP02008 142 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 FCGR3AP08637 254 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
TRIM13-201ENST00000356017 S100A5P33763 92 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 KIR2DS4P43632 304 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 KIR2DS1Q14954 304 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 KLF17Q5JT82 389 aaPredicted RBP12.71□□□□□ -0.37
TRIM13-201ENST00000356017 LAX1Q8IWV1 398 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 IZUMO1Q8IYV9 350 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 PRR18Q8N4B5 295 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 OR52M1Q8NGK5 317 aa12.71□□□□□ -0.37
TRIM13-201ENST00000356017 MIXL1Q9H2W2 232 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms