RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CCL2P13500 99 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SERPINA2P20848 420 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 FUT3P21217 361 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CD40P25942 277 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CHATP28329 748 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MDH2P40926 338 aaKnown RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CD200P41217 278 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 HAAOP46952 286 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 KCNJ3P48549 501 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 VEGFCP49767 419 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 GPM6AP51674 278 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 UBE2MP61081 183 aaKnown RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MRPS15P82914 257 aaKnown RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 PSG7Q13046 419 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 PLA2G7Q13093 441 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 HLXQ14774 488 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 TATDN3Q17R31 274 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 AWAT1Q58HT5 328 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 RNASE10Q5GAN6 216 aaKnown RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 PLAC9Q5JTB6 97 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 RGS7BPQ6MZT1 257 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 STEAP1BQ6NZ63 245 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SLC25A26Q70HW3 274 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MOB1BQ7L9L4 216 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MYPOPQ86VE0 399 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-201ENST00000355766 HOGA1Q86XE5 327 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 IZUMO1Q8IYV9 350 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CADM3Q8N126 398 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CHST4Q8NCG5 386 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 OR5D18Q8NGL1 313 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 OR10Z1Q8NGY1 313 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 OR13G1Q8NGZ3 307 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SLC25A40Q8TBP6 338 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 FAM216AQ8WUB2 273 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CCDC107Q8WV48 283 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SNAPC3Q92966 411 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 ERGIC1Q969X5 290 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 CMBLQ96DG6 245 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 RNF170Q96K19 258 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SCGB3A2Q96PL1 93 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 NEDD4LQ96PU5 975 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SPACA5Q96QH8 159 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 NRIP2Q9BQI9 281 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 SELENOIQ9C0D9 397 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 C20orf85Q9H1P6 137 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 ZMAT4Q9H898 229 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 C12orf4Q9NQ89 552 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 IFT46Q9NQC8 304 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM100Q9NV29 134 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 NUDT15Q9NV35 164 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MCUBQ9NWR8 336 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 RASL12Q9NYN1 266 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 KLK11Q9UBX7 282 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 POU2F3Q9UKI9 436 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 MGAT4AQ9UM21 535 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 ING4Q9UNL4 249 aa5.81□□□□□ -1.48
VPS13A-201ENST00000355766 RYR3Q15413 4870 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 DYSFO75923 2080 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 A0A0A6YYD4 124 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 IGKV1-12A0A0C4DH73 117 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 HMX3A6NHT5 357 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 VSTM5A8MXK1 200 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF732B4DXR9 585 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 TRIM77I1YAP6 450 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 SNAPC5O75971 98 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 SCAF4O95104 1147 aaKnown RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 RAB3DO95716 219 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 IGKV1D-12P01611 117 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 PGA5P0DJD9 388 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 GIFP27352 417 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 BLVRBP30043 206 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 FABP6P51161 128 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM50BP56557 158 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 KLF3P57682 345 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 HILS1P60008 231 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ERVK11-1P61568 191 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 RBM39Q14498 530 aaKnown RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF146Q15072 292 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 MOGAT2Q3SYC2 334 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 METTL11BQ5VVY1 283 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 RSBN1Q5VWQ0 802 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 OR2T2Q6IF00 324 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 OR10K2Q6IF99 312 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 SLC22A25Q6T423 547 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 C1QL2Q7Z5L3 287 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 TRAPPC6BQ86SZ2 158 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 AKAP14Q86UN6 197 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 TMEM17Q86X19 198 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 CALHM1Q8IU99 346 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ZDHHC22Q8N966 263 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 OR4C16Q8NGL9 310 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF418Q8TF45 676 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 NPRL2Q8WTW4 380 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 EMG1Q92979 244 aaKnown RBP5.8□□□□□ -1.48
VPS13A-201ENST00000355766 ARHGAP5-AS1Q96IT6 56 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 NEURL2Q9BR09 285 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 NICN1Q9BSH3 213 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 PECRQ9BY49 303 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 BPESC1Q9GZL8 116 aa5.8□□□□□ -1.48
VPS13A-201ENST00000355766 KCNK15Q9H427 330 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms