RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PAX5Q02548 391 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 ABCA11PQ4W5N1 156 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 PRAMEF6Q5VXH4 476 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 GGNBP1Q5YKI7 109 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FIP1L1Q6UN15 594 aaKnown RBP5.83□□□□□ -1.48
TRIM55-203ENST00000350034 LIAT1Q6ZQX7 453 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 ACOT7LQ6ZUV0 252 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 SLC51BQ86UW2 128 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 LRP11Q86VZ4 500 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FAM90A1Q86YD7 464 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 CCDC71LQ8N9Z2 235 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 NUP37Q8NFH4 326 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 OR11L1Q8NGX0 322 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 THAP6Q8TBB0 222 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 NEK7Q8TDX7 302 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 GLYATL2Q8WU03 294 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 TOMM40LQ969M1 308 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 VRK1Q99986 396 aaPredicted RBP5.83□□□□□ -1.48
TRIM55-203ENST00000350034 SYT3Q9BQG1 590 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 TOLLIPQ9H0E2 274 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 ARL6Q9H0F7 186 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 MSL2Q9HCI7 577 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 MBD2Q9UBB5 411 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 UBQLN2Q9UHD9 624 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FZR1Q9UM11 496 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 RAXQ9Y2V3 346 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 KCNIP3Q9Y2W7 256 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 MAB21L2Q9Y586 359 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 A6NLC8 198 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 SRRM5B3KS81 715 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 ATP6V1G2-DDX39BF2Z307 99 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 GPR31O00270 319 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 BCL2L11O43521 198 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 PSPNO60542 156 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 RP2O75695 350 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 LHBP01229 141 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 HEXAP06865 529 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 THBDP07204 575 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 BMP5P22003 454 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 GATA4P43694 442 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 KLF3P57682 345 aaPredicted RBP5.82□□□□□ -1.48
TRIM55-203ENST00000350034 RPS23P62266 143 aaKnown RBP5.82□□□□□ -1.48
TRIM55-203ENST00000350034 RBPJQ06330 500 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 LRRC37A5PQ49AS3 106 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 PHLDA2Q53GA4 152 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 ESCO2Q56NI9 601 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 SLC35E4Q6ICL7 350 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 PRSS54Q6PEW0 395 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 LGI3Q8N145 548 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 BVESQ8NE79 360 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 LILRB1Q8NHL6 650 aaPredicted RBP5.82□□□□□ -1.48
TRIM55-203ENST00000350034 LHFPL5Q8TAF8 219 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 MRPL24Q96A35 216 aaKnown RBP5.82□□□□□ -1.48
TRIM55-203ENST00000350034 MEGF10Q96KG7 1140 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 TMEM56Q96MV1 263 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 AQP10Q96PS8 301 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 VKORC1Q9BQB6 163 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 GSX2Q9BZM3 304 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 SLC5A7Q9GZV3 580 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 METTL8Q9H825 291 aaKnown RBP5.82□□□□□ -1.48
TRIM55-203ENST00000350034 TAAR3PQ9P1P4 343 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 DNAJB11Q9UBS4 358 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 GLS2Q9UI32 602 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 MEMO1Q9Y316 297 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 OR2W1Q9Y3N9 320 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 TMEM56-RWDD3S4R434 201 aa5.82□□□□□ -1.48
TRIM55-203ENST00000350034 GTF3C1Q12789 2109 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 NAV3Q8IVL0 2385 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 SETD2Q9BYW2 2564 aaPredicted RBP5.81□□□□□ -1.48
TRIM55-203ENST00000350034 IGHV3-64DA0A0J9YX35 117 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 C3orf85A0A1B0GTC6 90 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 TMEM30CPA0ZSE6 113 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 ANKRD34BA5PLL1 514 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 DPRXA6NFQ7 191 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 BET1O15155 118 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 ZNF737O75373 536 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 PGLYRP1O75594 196 aaPredicted RBP5.81□□□□□ -1.48
TRIM55-203ENST00000350034 IFNA21P01568 189 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 ADH4P08319 380 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 HOXB5P09067 269 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 EGR1P18146 543 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 PTAFRP25105 342 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 UCP1P25874 307 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 OR3A1P47881 315 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 CEBPDP49716 269 aaPredicted RBP5.81□□□□□ -1.48
TRIM55-203ENST00000350034 UBA52P62987 128 aaKnown RBP5.81□□□□□ -1.48
TRIM55-203ENST00000350034 SRPXP78539 464 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 RAB32Q13637 225 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 TESK1Q15569 626 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 IAH1Q2TAA2 248 aaPredicted RBP5.81□□□□□ -1.48
TRIM55-203ENST00000350034 SMIM21Q3B7S5 101 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 SP6Q3SY56 376 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 SPRNQ5BIV9 151 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 ZNF818PQ6ZRF7 136 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 TBC1D26Q86UD7 250 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 CD177Q8N6Q3 437 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 ZNF565Q8N9K5 539 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 OR2Z1Q8NG97 314 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 OR5T2Q8NGG2 359 aa5.81□□□□□ -1.48
TRIM55-203ENST00000350034 OR1S1Q8NH92 325 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms