RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 VSIG4Q9Y279 399 aa5.16□□□□□ -1.58
RFC1-201ENST00000349703 NTNG1Q9Y2I2 539 aa5.16□□□□□ -1.58
RFC1-201ENST00000349703 C1orf105O95561 183 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 LMO1P25800 156 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 NPY1RP25929 384 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 AMTP48728 403 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 HBG1P69891 147 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 HBG2P69892 147 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 SLC7A9P82251 487 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 RBMY1FQ15415 496 aaKnown RBP5.15□□□□□ -1.58
RFC1-201ENST00000349703 OR2B11Q5JQS5 317 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 OPN5Q6U736 354 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 ZNF705AQ6ZN79 300 aaPredicted RBP5.15□□□□□ -1.58
RFC1-201ENST00000349703 LYG2Q86SG7 212 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 NUDCD2Q8WVJ2 157 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 TMEM101Q96IK0 257 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 HCAR1Q9BXC0 346 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 PRSS16Q9NQE7 514 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 FLRT3Q9NZU0 649 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 TSPAN2O60636 221 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 SNAI1O95863 264 aaPredicted RBP5.15□□□□□ -1.58
RFC1-201ENST00000349703 MT-ND6P03923 174 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 CT45A8P0DMV1 189 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 CT45A9P0DMV2 189 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 RPL29P47914 159 aaKnown RBP5.15□□□□□ -1.58
RFC1-201ENST00000349703 PKIAP61925 76 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 CT45A2Q5DJT8 189 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 ZNF295-AS1Q8N0V1 137 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 LRRC25Q8N386 305 aaPredicted RBP5.15□□□□□ -1.58
RFC1-201ENST00000349703 OR4X1Q8NH49 305 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 SCN1AP35498 2009 aa5.15□□□□□ -1.58
RFC1-201ENST00000349703 A0A1W2PR80 420 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 CLEC18AA5D8T8 446 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 ZNF729A6NN14 1252 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 COX7A2P2O60397 106 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 IGF2P01344 180 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 FOLR2P14207 255 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 PIGPP57054 158 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 TAL2Q16559 108 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 CLEC18BQ6UXF7 455 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 C2orf73Q8N5S3 287 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 CLEC18CQ8NCF0 446 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 MORN4Q8NDC4 146 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 OR52A5Q9H2C5 316 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 TAF9BQ9HBM6 251 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 ZNF107Q9UII5 783 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 TNFSF18Q9UNG2 199 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 FOXA2Q9Y261 457 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 CSAG2Q9Y5P2 127 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 RALGAPA2Q2PPJ7 1873 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 DOCK5Q9H7D0 1870 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 ANKRD36A6QL64 1941 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 COL11A1P12107 1806 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 ZNF840PA6NDX5 716 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 MFNGO00587 321 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 SYNGR3O43761 229 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 GCM2O75603 506 aaPredicted RBP5.15□□□□□ -1.59
RFC1-201ENST00000349703 TNFSF13O75888 250 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 OR2C1O95371 312 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 ZNF688P0C7X2 276 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 FXYD6P3P58550 94 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 INSL4Q14641 139 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 OR1Q1Q15612 314 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 OOSP2Q86WS3 158 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 C17orf78Q8N4C9 275 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 PPP1R1CQ8WVI7 109 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 WDR34Q96EX3 536 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 PIK3IP1Q96FE7 263 aa5.15□□□□□ -1.59
RFC1-201ENST00000349703 ANTXRLA6NF34 631 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 CCL21O00585 134 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ISG15P05161 165 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 TEAD1P28347 426 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 MAS1LP35410 378 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 MDH2P40926 338 aaKnown RBP5.14□□□□□ -1.59
RFC1-201ENST00000349703 RBM11P57052 281 aaKnown RBP5.14□□□□□ -1.59
RFC1-201ENST00000349703 IL17RELQ6ZVW7 336 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ZNF461Q8TAF7 563 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 TFGQ92734 400 aaPredicted RBP5.14□□□□□ -1.59
RFC1-201ENST00000349703 ACY3Q96HD9 319 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 MS4A8Q9BY19 250 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 PRDM13Q9H4Q3 707 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 SPANXA1Q9NS26 97 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ZNF701Q9NV72 531 aaPredicted RBP5.14□□□□□ -1.59
RFC1-201ENST00000349703 POLDIP2Q9Y2S7 368 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 PVRP15151 417 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 FGF7P21781 194 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 CD80P33681 288 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 NPBWR2P48146 333 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 CLDN12P56749 244 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ELOCQ15369 112 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 FAM27D1Q5T7N8 215 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ANGPTL5Q86XS5 388 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 ZNF440Q8IYI8 595 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 EXD3Q8N9H8 876 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 SLC22A12Q96S37 553 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 MCTS1Q9ULC4 181 aaKnown RBP5.14□□□□□ -1.59
RFC1-201ENST00000349703 FLVCR1Q9Y5Y0 555 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 LTBP1Q14766 1721 aa5.14□□□□□ -1.59
RFC1-201ENST00000349703 NRXN2Q9P2S2 1712 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms