RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 KMT5CQ86Y97 462 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 RNF138Q8WVD3 245 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 ACY3Q96HD9 319 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 PYGO2Q9BRQ0 406 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 RSG1Q9BU20 258 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 ZNF160Q9HCG1 818 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 POLR3KQ9Y2Y1 108 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-202ENST00000348987 EML6Q6ZMW3 1958 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 A0A1W2PQM1 296 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 CST2P09228 141 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 METTL15P1P0C7V9 234 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 HERV-K104P61576 105 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
SCARF1-202ENST00000348987 TLE1Q04724 770 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 PDCD1Q15116 288 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 C1orf194Q5T5A4 169 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 LRP11Q86VZ4 500 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 ELOVL1Q9BW60 279 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 PRDM6Q9NQX0 595 aa16.05■□□□□ 0.16
SCARF1-202ENST00000348987 H3BP45 60 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 CELA2AP08217 269 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 ZNF726P1Q15940 193 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 FAM180AQ6UWF9 173 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 ZNF705AQ6ZN79 300 aaPredicted RBP16.04■□□□□ 0.16
SCARF1-202ENST00000348987 OR51G1Q8NGK1 321 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 NAT6Q93015 286 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 V9GYS6 101 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 TMEM210A6NLX4 147 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 GALR1P47211 349 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 OR3A1P47881 315 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 ZNF774Q6NX45 483 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 TMEM170AQ8WVE7 144 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 HLA-CQ95604 372 aa16.04■□□□□ 0.16
SCARF1-202ENST00000348987 BAXQ07812 192 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SLC25A47Q6Q0C1 308 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 RABEPKQ7Z6M1 372 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 OR2M3Q8NG83 312 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 PP6455Q8WZ26 134 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SIGLEC12Q96PQ1 595 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SMIM7Q9BQ49 75 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 OPN3Q9H1Y3 402 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-202ENST00000348987 FKBP11Q9NYL4 201 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 B4E171 279 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 K7ESF4 209 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 RPLP1P05386 114 aaKnown RBP16.03■□□□□ 0.16
SCARF1-202ENST00000348987 TSPAN7P41732 249 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 GRB2P62993 217 aaKnown RBP16.03■□□□□ 0.16
SCARF1-202ENST00000348987 RTP5Q14D33 572 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 PIGYQ3MUY2 71 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SLC25A53Q5H9E4 307 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SPIN3Q5JUX0 258 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 TBC1D26Q86UD7 250 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SELENOHQ8IZQ5 122 aaKnown RBP16.03■□□□□ 0.16
SCARF1-202ENST00000348987 SPEM1Q8N4L4 309 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 RASL10BQ96S79 203 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 PRSS50Q9UI38 385 aa16.03■□□□□ 0.16
SCARF1-202ENST00000348987 PPYP01298 95 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 IGLV3-1P01715 115 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 UCP3P55916 312 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 EXT1Q16394 746 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 SPIN2AQ99865 258 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 SPIN2BQ9BPZ2 258 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 RBKSQ9H477 322 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 FRYQ5TBA9 3013 aa16.02■□□□□ 0.16
SCARF1-202ENST00000348987 GNRHRP30968 328 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 WNT5AP41221 380 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 CXCL12P48061 93 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 PAX9P55771 341 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 PRSS12P56730 875 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 Q6ZPA2 131 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF286AQ9HBT8 521 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 NAT8Q9UHE5 227 aa16.02■□□□□ 0.15
SCARF1-202ENST00000348987 IGHV3-15A0A0B4J1V0 119 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 ZFAND5O76080 213 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 CCKARP32238 428 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 ID3Q02535 119 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 TGIF2LYQ8IUE0 185 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 OR2V1Q8NHB1 315 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 OR5B12Q96R08 314 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 PCED1AQ9H1Q7 454 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 KIR2DL5BA0A0G2JN68 375 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 KIR2DL5BA0A0G2JPC4 375 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 H7BYZ3 331 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 TOX3O15405 576 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-202ENST00000348987 IFNA5P01569 189 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 CLDN17P56750 224 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 FAM3BP58499 235 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-202ENST00000348987 CCL7P80098 99 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 IL24Q13007 206 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 PHYHD1Q5SRE7 291 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 KIR2DL5AQ8N109 375 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 TMEM56Q96MV1 263 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 P2RX4Q99571 388 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 Q9N2K0 584 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 MRPS18CQ9Y3D5 142 aaKnown RBP16.01■□□□□ 0.15
SCARF1-202ENST00000348987 TMEM56-RWDD3S4R434 201 aa16.01■□□□□ 0.15
SCARF1-202ENST00000348987 SRPXP78539 464 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 TMEM267Q0VDI3 215 aaPredicted RBP16■□□□□ 0.15
SCARF1-202ENST00000348987 GAGE1Q13065 139 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms