RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 MC5RP33032 325 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 ABHD14AQ9BUJ0 271 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 MMP24Q9Y5R2 645 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 GATCO43716 136 aaKnown RBP13.45□□□□□ -0.26
PTPRO-202ENST00000348962 INHBBP09529 407 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 HLA-GP17693 338 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 MGAT2Q10469 447 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 MIDNQ504T8 468 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 FDCSPQ8NFU4 85 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 TRAV39A0A0B4J263 110 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 MMP7P09237 267 aaPredicted RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 AMTP48728 403 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 RPL30P62888 115 aaKnown RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 ZNF273Q14593 569 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 GUK1Q16774 197 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 C4orf17Q53FE4 359 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 MYPOPQ86VE0 399 aaPredicted RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 NPAS1Q99742 590 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 ASCL3Q9NQ33 180 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 VSIG4Q9Y279 399 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 LILRB1Q8NHL6 650 aaPredicted RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 ADAT3Q96EY9 351 aaPredicted RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 PLXNB2O15031 1838 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 OR1K1Q8NGR3 316 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 TMPRSS5Q9H3S3 457 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 TTRP02766 147 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 MPV17P39210 176 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 RBM11P57052 281 aaKnown RBP13.44□□□□□ -0.26
PTPRO-202ENST00000348962 PPP1R32Q7Z5V6 425 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 GCSAMQ8N6F7 178 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 STXBP6Q8NFX7 210 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 ADIPOR1Q96A54 375 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 PGLYRP3Q96LB9 341 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 KCNK15Q9H427 330 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
PTPRO-202ENST00000348962 ATP6V1G2-DDX39BF2Z307 99 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 CTDSPLO15194 276 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 ID1P41134 155 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 ZNF429Q86V71 674 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 C11orf42Q8N5U0 333 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 SLC24A4Q8NFF2 622 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 CSRP1P21291 193 aaKnown RBP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 REG1BP48304 166 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 SPCS3P61009 180 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 LSM11P83369 360 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 OR1L6Q8NGR2 347 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 PERPQ96FX8 193 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 J3QR06 171 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 SMPD2O60906 423 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 TXNDC12O95881 172 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 NPY1RP25929 384 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 PPP1CCP36873 323 aaKnown RBP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 PDLIM4P50479 330 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 C19orf57Q0VDD7 668 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 RBPMS2Q6ZRY4 209 aaKnown RBP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 NOL4LQ96MY1 436 aaPredicted RBP13.43□□□□□ -0.26
PTPRO-202ENST00000348962 ELOVL5Q9NYP7 299 aa13.43□□□□□ -0.26
PTPRO-202ENST00000348962 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
PTPRO-202ENST00000348962 OR2T8A6NH00 312 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 PGA4P0DJD7 388 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 TRAV8-7A0A075B6U6 113 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 SYNGR3O43761 229 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 CHST1O43916 411 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 LOXL3P58215 753 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ST3GAL2Q16842 350 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 TMEM241Q24JQ0 296 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 CLEC18BQ6UXF7 455 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 OR8G5Q8NG78 346 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 TMEM18Q96B42 140 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 HILPDAQ9Y5L2 63 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 NINQ8N4C6 2090 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 RNASEK-C17orf49H0YIS7 233 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ZNF737O75373 536 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 SNX22Q96L94 193 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ZNF488Q96MN9 340 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 FBXL17Q9UF56 701 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 CYB5R1Q9UHQ9 305 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ADAP1O75689 374 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 CDS2O95674 445 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 TPPP2P59282 170 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 SLC2A8Q9NY64 477 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 ADAMTSL1Q8N6G6 1762 aa13.42□□□□□ -0.26
PTPRO-202ENST00000348962 SMIM10L1P0DMW3 83 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 C10orf111Q8N326 155 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 MRGPRFQ96AM1 343 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 SMIM10Q96HG1 83 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 MRPL22Q9NWU5 206 aaKnown RBP13.41□□□□□ -0.26
PTPRO-202ENST00000348962 HTN1P15515 57 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 RPL27AP46776 148 aaKnown RBP13.41□□□□□ -0.26
PTPRO-202ENST00000348962 P2RY1P47900 373 aa13.41□□□□□ -0.26
PTPRO-202ENST00000348962 ANKRD55Q3KP44 614 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms