RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 GFRALQ6UXV0 394 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C22orf34Q6ZV56 151 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MOB1BQ7L9L4 216 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 Q9UFV3 132 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PLCE1Q9P212 2302 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 hCG_1807616A0A1W2PRN6 198 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF250P15622 560 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RND3P61587 244 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ACP7Q6ZNF0 438 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PRR18Q8N4B5 295 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RBPMSQ93062 196 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CNTNAP3BQ96NU0 1288 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CNTNAP3Q9BZ76 1288 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TAAR3PQ9P1P4 343 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SESN1Q9Y6P5 492 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NBEAQ8NFP9 2946 aa11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HSD17B6O14756 317 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LMO1P25800 156 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GLRXP35754 106 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 AQP10Q96PS8 301 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GLS2Q9UI32 602 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SH3BGRL2Q9UJC5 107 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FBXO9Q9UK97 447 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 VHLLQ6RSH7 139 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SLC35G3Q8N808 338 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RELL2Q8NC24 303 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CXorf58Q96LI9 332 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 DMRTA2Q96SC8 542 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PIGMQ9H3S5 423 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 DNAJB11Q9UBS4 358 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PFDN2Q9UHV9 154 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ERRFI1Q9UJM3 462 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 UBE2J1Q9Y385 318 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 WIPI2Q9Y4P8 454 aa11.9□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NPIPB11E5RHQ5 1161 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DEDDO75618 318 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 PTBP3O95758 552 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 ASF1BQ9NVP2 202 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 A0A1B0GW55 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TFF1P04155 84 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L2P0CJ85 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L3P0CJ86 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L4P0CJ87 422 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L5P0CJ88 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L6P0CJ89 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4L7P0CJ90 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 CCKARP32238 428 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SRPXP78539 464 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SMCO1Q147U7 214 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SMIM21Q3B7S5 101 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 PDZD9Q8IXQ8 264 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SDHAF2Q9NX18 166 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 DUX4Q9UBX2 424 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TMED3Q9Y3Q3 217 aa11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 LSM5Q9Y4Y9 91 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-202ENST00000346416 SPTA1P02549 2419 aa11.88□□□□□ -0.51
CDK5RAP1-202ENST00000346416 HSPA12AO43301 675 aa11.88□□□□□ -0.51
CDK5RAP1-202ENST00000346416 TNFSF12O43508 249 aa11.88□□□□□ -0.51
CDK5RAP1-202ENST00000346416 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP1-202ENST00000346416 CD200P41217 278 aa11.88□□□□□ -0.51
CDK5RAP1-202ENST00000346416 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms