RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HLA-DOBP13765 273 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 NMSQ5H8A3 153 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 OR10G6Q8NH81 332 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 KLHL13Q9P2N7 655 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 MRPS16Q9Y3D3 137 aaKnown RBP15.97■□□□□ 0.15
SMPD1-201ENST00000342245 CHD3Q12873 2000 aaKnown RBP15.97■□□□□ 0.15
SMPD1-201ENST00000342245 ANKUB1A6NFN9 424 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 RNF212BA8MTL3 300 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 MS4A18H0YCH9 400 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 FCGR2AP12318 317 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 DRD3P35462 400 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 COMPP49747 757 aaPredicted RBP15.97■□□□□ 0.15
SMPD1-201ENST00000342245 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
SMPD1-201ENST00000342245 SHBQ15464 509 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 MS4A18Q3C1V0 323 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 CRIP3Q6Q6R5 217 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 C10orf35Q96D05 121 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 BMFQ96LC9 184 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 PATZ1Q9HBE1 687 aaKnown RBP15.97■□□□□ 0.15
SMPD1-201ENST00000342245 POLR1DQ9Y2S0 133 aa15.97■□□□□ 0.15
SMPD1-201ENST00000342245 IGKV1D-43A0A0B4J1Z2 117 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 FRG2CA6NGY1 282 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 CLPSP04118 112 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 PAX9P55771 341 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 GRB2P62993 217 aaKnown RBP15.96■□□□□ 0.15
SMPD1-201ENST00000342245 SPATA45Q537H7 98 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 Q6ZN92 141 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF709Q8N972 641 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 KLHDC3Q9BQ90 382 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 CHODLQ9H9P2 273 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF586Q9NXT0 402 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 TRAV9-1A0A075B6T8 112 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 OPRM1P35372 400 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 RRADP55042 308 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 APOOQ9BUR5 198 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 ZNF703Q9H7S9 590 aaPredicted RBP15.96■□□□□ 0.15
SMPD1-201ENST00000342245 ATG2AQ2TAZ0 1938 aa15.96■□□□□ 0.15
SMPD1-201ENST00000342245 A0A0J9YY10 115 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 HCRTR1O43613 425 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 TRAPPC6AO75865 159 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 NRASP01111 189 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 KRASP01116 189 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 IGLC2P0DOY2 106 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 IGLC3P0DOY3 106 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 SLC25A6P12236 298 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 CCL5P13501 91 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 CDKN1AP38936 164 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 LRRC75BQ2VPJ9 315 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 H1FNTQ75WM6 255 aaPredicted RBP15.95■□□□□ 0.14
SMPD1-201ENST00000342245 PLPPR1Q8TBJ4 325 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 APH1AQ96BI3 265 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 VSIRQ9H7M9 311 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 DEC1Q9P2X7 70 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 TIMM9Q9Y5J7 89 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 PRSS47A8MTI9 375 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 MLNRO43193 412 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 TNFSF4P23510 183 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 ADMP35318 185 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 HBG1P69891 147 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 HBG2P69892 147 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 C20orf196Q8IYI0 205 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 OR5B3Q8NH48 314 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 NUDT11Q96G61 164 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 SAMD10Q9BYL1 202 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 SERGEFQ9UGK8 458 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 LHFPL6Q9Y693 200 aa15.95■□□□□ 0.14
SMPD1-201ENST00000342245 GPM6BQ13491 265 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 RNPS1Q15287 305 aaKnown RBP15.94■□□□□ 0.14
SMPD1-201ENST00000342245 PLPPR5Q32ZL2 321 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 TCTEX1D1Q8N7M0 179 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 NEIL1Q96FI4 390 aaPredicted RBP15.94■□□□□ 0.14
SMPD1-201ENST00000342245 GMPPAQ96IJ6 420 aaPredicted RBP15.94■□□□□ 0.14
SMPD1-201ENST00000342245 ZDHHC11Q9H8X9 412 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 SLC35D1Q9NTN3 355 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 A0A1B0GUS0 222 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 ALG1L2C9J202 215 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 PPYP01298 95 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 CRISP2P16562 243 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 RPS21P63220 83 aaKnown RBP15.94■□□□□ 0.14
SMPD1-201ENST00000342245 Q0VG73 95 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 TBC1D26Q86UD7 250 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 WDFY1Q8IWB7 410 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 SIGLECL1Q8N7X8 197 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 ELOVL5Q9NYP7 299 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 PPIAL4AQ9Y536 164 aa15.94■□□□□ 0.14
SMPD1-201ENST00000342245 PRSS38A1L453 326 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 DIRC3C9JPN6 131 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 HYPMO75409 117 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 EML2O95834 649 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 CTSEP14091 401 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 IL12BP29460 328 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 PNKDQ8N490 385 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 OR4F5Q8NH21 305 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 SMIM12Q96EX1 92 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 PGAM5Q96HS1 289 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 OR4F4Q96R69 305 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 NXF5Q9H1B4 397 aaKnown RBP15.93■□□□□ 0.14
SMPD1-201ENST00000342245 TUBG2Q9NRH3 451 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms