RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 MAGEA13PA6NCF6 341 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 OR2F2O95006 317 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 FSTP19883 344 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 GLIPR1L1Q6UWM5 242 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 LYG1Q8N1E2 194 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 NEK7Q8TDX7 302 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 WIPF2Q8TF74 440 aaPredicted RBP16.12■□□□□ 0.17
SYNE2-201ENST00000341472 MRPS24Q96EL2 167 aaKnown RBP16.12■□□□□ 0.17
SYNE2-201ENST00000341472 DERL3Q96Q80 235 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 FKBP14Q9NWM8 211 aa16.12■□□□□ 0.17
SYNE2-201ENST00000341472 PTGES3LE9PB15 166 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 PIN1P1O15428 100 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 MT-ND4P03905 459 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 OPN1MWP04001 364 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 MAS1P04201 325 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 OPN1MW2P0DN77 364 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 OPN1MW3P0DN78 364 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 CRHBPP24387 322 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 SSTR5P35346 364 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 MADCAM1Q13477 382 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 CENPVQ7Z7K6 275 aaPredicted RBP16.11■□□□□ 0.17
SYNE2-201ENST00000341472 NDUFA11Q86Y39 141 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 THNSL2Q86YJ6 484 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 CCDC107Q8WV48 283 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 TOMM40LQ969M1 308 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 ARL11Q969Q4 196 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 CITED2Q99967 270 aaPredicted RBP16.11■□□□□ 0.17
SYNE2-201ENST00000341472 SPACA1Q9HBV2 294 aa16.11■□□□□ 0.17
SYNE2-201ENST00000341472 MCRIP1C9JLW8 97 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 TNFAIP8O95379 198 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 DOC2BQ14184 412 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 TMEM95Q3KNT9 176 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 ABCA11PQ4W5N1 156 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 RNLSQ5VYX0 342 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 OR5AU1Q8NGC0 362 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 OR10X1Q8NGY0 326 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 THRSPQ92748 146 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 DSCAML1Q8TD84 2053 aa16.1■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A18PA6NE21 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A16PA6NEW6 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A20PA6NIJ5 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A9PA6NNJ1 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A12PA8MX19 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A5PA8MXJ8 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 M0QZK8 103 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 MRPS14O60783 128 aaKnown RBP16.09■□□□□ 0.17
SYNE2-201ENST00000341472 CDK1P06493 297 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A15PP0C7V4 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A13PP0C7W8 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A14PP0C7W9 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 FAM90A24PP0C7X0 464 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 MAPK3P27361 379 aaPredicted RBP16.09■□□□□ 0.17
SYNE2-201ENST00000341472 GNG10P50151 68 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 GABARAPL2P60520 117 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 AWAT2Q6E213 333 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 C1QL4Q86Z23 238 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 MS4A15Q8N5U1 240 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 DUSP21Q9H596 190 aa16.09■□□□□ 0.17
SYNE2-201ENST00000341472 C15orf65H3BRN8 121 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 ORC5O43913 435 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 LPLP06858 475 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 RAB7AP51149 207 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 SLC35A2P78381 396 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 KCTD21Q4G0X4 260 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 ACSM3Q53FZ2 586 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 FBLN7Q53RD9 439 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 ZNF497Q6ZNH5 498 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 DRAM1Q8N682 238 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 OR52M1Q8NGK5 317 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 R3HDM4Q96D70 268 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 SELENOIQ9C0D9 397 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 BANF2Q9H503 90 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 PEX16Q9Y5Y5 336 aa16.08■□□□□ 0.16
SYNE2-201ENST00000341472 NOTCH3Q9UM47 2321 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 AMY1AP04745 511 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 AMY2AP04746 511 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 DIAPH2-AS1Q14236 149 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 C9orf152Q5JTZ5 239 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 RAB12Q6IQ22 244 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 UNQ9370/PRO34162Q6UXP9 181 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 LYPD6Q86Y78 171 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 OR8H3Q8N146 312 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 NKAIN3Q8N8D7 197 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 OR4F17Q8NGA8 305 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 OR56B4Q8NH76 319 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 OR4F4Q96R69 305 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 UQCC2Q9BRT2 126 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 MND1Q9BWT6 205 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 ETAA1Q9NY74 926 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 RCC2Q9P258 522 aaKnown RBP16.07■□□□□ 0.16
SYNE2-201ENST00000341472 TRAPPC2LQ9UL33 140 aa16.07■□□□□ 0.16
SYNE2-201ENST00000341472 SH2D7A6NKC9 451 aaPredicted RBP16.06■□□□□ 0.16
SYNE2-201ENST00000341472 AIPO00170 330 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 SDCBPO00560 298 aaPredicted RBP16.06■□□□□ 0.16
SYNE2-201ENST00000341472 RGS10O43665 173 aa16.06■□□□□ 0.16
SYNE2-201ENST00000341472 CRTAPO75718 401 aaPredicted RBP16.06■□□□□ 0.16
SYNE2-201ENST00000341472 GAPDHP04406 335 aaKnown RBP16.06■□□□□ 0.16
SYNE2-201ENST00000341472 SNRNP70P08621 437 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms