RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 IGHV1-45A0A0A0MS14 117 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 MPPED1O15442 326 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 COX6A1P12074 109 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 PTGDSP41222 190 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 FUT6P51993 359 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 ERVS71-1P61550 626 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
USP1-201ENST00000339950 HMGN3Q15651 99 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
USP1-201ENST00000339950 LHFPL2Q6ZUX7 228 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 FAM185AQ8N0U4 392 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 POC1AQ8NBT0 407 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 MALSU1Q96EH3 234 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 FAHD2AQ96GK7 314 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 MSL2Q9HCI7 577 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 DEPPQ9NTK1 212 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 PRSS50Q9UI38 385 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 TINAGQ9UJW2 476 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 IL2RAP01589 272 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 PSG2P11465 335 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 VAX1Q5SQQ9 334 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 WDR5BQ86VZ2 330 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 SIGLEC12Q96PQ1 595 aa10.31□□□□□ -0.76
USP1-201ENST00000339950 CDX2Q99626 313 aaPredicted RBP10.31□□□□□ -0.76
USP1-201ENST00000339950 RHBDL1O75783 438 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 TNFSF15O95150 251 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 CTSDP07339 412 aaPredicted RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 CASP6P55212 293 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 LSM6P62312 80 aaKnown RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 CPEB3Q8NE35 698 aaKnown RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 WFIKKN1Q96NZ8 548 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 UCK1Q9HA47 277 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 OSGIN2Q9Y236 505 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 TCAPO15273 167 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 GPR137BO60478 399 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 ZNF880Q6PDB4 577 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 TIPARPQ7Z3E1 657 aaKnown RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 PTX4Q96A99 478 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 SPSB1Q96BD6 273 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 FAM3AP98173 230 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 BAXQ07812 192 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 TWSG1Q9GZX9 223 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 WNT5BQ9H1J7 359 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 BARX1Q9HBU1 254 aaPredicted RBP10.3□□□□□ -0.76
USP1-201ENST00000339950 OR1A1Q9P1Q5 309 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 GNG12Q9UBI6 72 aa10.3□□□□□ -0.76
USP1-201ENST00000339950 A0A1W2PPE3 182 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 PPP5D1E7EU14 171 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 CER1O95813 267 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 HEXAP06865 529 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 EGR1P18146 543 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 LINC00205P59089 165 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 FAM27BQ5VT28 67 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 ZNF66Q6ZN08 573 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 RAB39BQ96DA2 213 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 Q96M66 194 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 WFDC1Q9HC57 220 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 CYTL1Q9NRR1 136 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 SLC39A9Q9NUM3 307 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
USP1-201ENST00000339950 IGKV1D-13A0A0B4J2D9 117 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 LILRA1O75019 489 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 SRSF10O75494 262 aaKnown RBP10.29□□□□□ -0.76
USP1-201ENST00000339950 IGKV1-13P0DP09 117 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 SSTP61278 116 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 ZNF818PQ6ZRF7 136 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 C1orf87Q8N0U7 546 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 EIF4E3Q8N5X7 224 aaKnown RBP10.29□□□□□ -0.76
USP1-201ENST00000339950 DNASE2BQ8WZ79 361 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 WSB1Q9Y6I7 421 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 IFI6P09912 130 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 CEACAM6P40199 344 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 QRFPP83859 136 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 ZIC4Q8N9L1 334 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 NTNG2Q96CW9 530 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 TVP23CQ96ET8 276 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 TRIB1Q96RU8 372 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 SLC25A31Q9H0C2 315 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 PLEKHA2Q9HB19 425 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 PNRC2Q9NPJ4 139 aaKnown RBP10.29□□□□□ -0.76
USP1-201ENST00000339950 KCNIP1Q9NZI2 227 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 CRIM1Q9NZV1 1036 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
USP1-201ENST00000339950 DOPEY2Q9Y3R5 2298 aa10.29□□□□□ -0.76
USP1-201ENST00000339950 TAAR5O14804 337 aa10.28□□□□□ -0.76
USP1-201ENST00000339950 DEDDO75618 318 aa10.28□□□□□ -0.76
USP1-201ENST00000339950 RAC2P15153 192 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms