RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ANGPTL7O43827 346 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 CXCL13O43927 109 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 NDUFS6O75380 124 aaKnown RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 WISP2O76076 250 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 MT-ND4LP03901 98 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 NTF4P34130 210 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 CYB561P49447 251 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 RAB5BP61020 215 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 PMP22Q01453 160 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 ZNF766Q5HY98 468 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 SHEQ5VZ18 495 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 SP5Q6BEB4 398 aaPredicted RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 ZNF880Q6PDB4 577 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 MOB1BQ7L9L4 216 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 MKXQ8IYA7 352 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 ZNF611Q8N823 705 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 MDS2Q8NDY4 140 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 ERGIC1Q969X5 290 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 ALKBH3Q96Q83 286 aaPredicted RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 CABLES2Q9BTV7 478 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 LYRM2Q9NU23 88 aaPredicted RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 B4GALT7Q9UBV7 327 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 RCL1Q9Y2P8 373 aaKnown RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 C3orf85A0A1B0GTC6 90 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OR5B21A6NL26 309 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 H0Y980 276 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 TK1P04183 234 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 S100A8P05109 93 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 VDAC1P21796 283 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 AADACP22760 399 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 CD80P33681 288 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OPRM1P35372 400 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ARR3P36575 388 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 AKR1C2P52895 323 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 AKR1C1Q04828 323 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 GUK1Q16774 197 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 CEACAM21Q3KPI0 293 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 PIGYQ3MUY2 71 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ZNF468Q5VIY5 522 aaPredicted RBP9.21□□□□□ -0.94
RTN3-201ENST00000338850 CBLN2Q8IUK8 224 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OR2C3Q8N628 320 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OR5A2Q8NGI9 324 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OR5D13Q8NGL4 314 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 OR1J1Q8NGS3 322 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 AKR7LQ8NHP1 331 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ITLN2Q8WWU7 325 aaPredicted RBP9.21□□□□□ -0.94
RTN3-201ENST00000338850 TOMM40LQ969M1 308 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
RTN3-201ENST00000338850 JSRP1Q96MG2 331 aaPredicted RBP9.21□□□□□ -0.94
RTN3-201ENST00000338850 SIGLEC12Q96PQ1 595 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 FAM173AQ9BQD7 235 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 HES7Q9BYE0 225 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 PKIBQ9C010 78 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 PLEKHF2Q9H8W4 249 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 GP6Q9HCN6 339 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 C19orf12Q9NSK7 152 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 TREM2Q9NZC2 230 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ZDHHC8Q9ULC8 765 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 FAM96BQ9Y3D0 163 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ATP23Q9Y6H3 246 aa9.21□□□□□ -0.94
RTN3-201ENST00000338850 ZNF98A6NK75 572 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 PHF1O43189 567 aaPredicted RBP9.2□□□□□ -0.94
RTN3-201ENST00000338850 HSPA12AO43301 675 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 CRYBA1P05813 215 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 OR8U9P0C7N5 309 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 PTAFRP25105 342 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 S100GP29377 79 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 MDH2P40926 338 aaKnown RBP9.2□□□□□ -0.94
RTN3-201ENST00000338850 CA7P43166 264 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 NKX2-1P43699 371 aaPredicted RBP9.2□□□□□ -0.94
RTN3-201ENST00000338850 CAMLGP49069 296 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 CTAG1AP78358 180 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.94
RTN3-201ENST00000338850 ID3Q02535 119 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 OR1C1Q15619 314 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 MIDNQ504T8 468 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 Q6ZPA2 131 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 LYZL2Q7Z4W2 148 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 YRDCQ86U90 279 aaKnown RBP9.2□□□□□ -0.94
RTN3-201ENST00000338850 C1QL4Q86Z23 238 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 ZDHHC23Q8IYP9 409 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 SLC35G3Q8N808 338 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 OR10G4Q8NGN3 311 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 OR8U1Q8NH10 309 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 RXFP4Q8TDU9 374 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 CYYR1Q96J86 154 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 ZNF442Q9H7R0 627 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 ZNF703Q9H7S9 590 aaPredicted RBP9.2□□□□□ -0.94
RTN3-201ENST00000338850 WFDC1Q9HC57 220 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 COA4Q9NYJ1 87 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 KIAA1456Q9P272 454 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 ARHGAP21Q5T5U3 1957 aa9.2□□□□□ -0.94
RTN3-201ENST00000338850 MED12Q93074 2177 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms